CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0307600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.59 78.0 Os11g0307600 AK070683.1 - Conserved hypothetical protein 2e-2 At2g44390 DC1 domain-containing protein S.X. H.G.
0.67 87.2 Os01g0210100 NM_197507.1 - - 2e+0 At5g38760 unknown protein S.X. H.G.
0.61 81.2 Os11g0280500 AK071642.1 - Hypothetical protein 2e-1 At4g26840 SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1) S.X. H.G.
0.40 51.1 Os05g0580550 9633.m04745 - - 2e+0 At5g35680 eukaryotic translation initiation factor 1A, putative / eIF-1A, putative / eIF-4C, putative S.X. H.G.
0.40 51.1 Os01g0578700 AK099956.1 - Hypothetical protein 2e+0 At5g63370 protein kinase family protein S.X. H.G.
0.36 44.0 Os11g0258900 AK102638.1 - Conserved hypothetical protein 9e-1 At5g38760 unknown protein S.X. H.G.
0.13 8.2 Os01g0889200 AK062351.1 - RNA polymerase III RPC4 family protein 4e-1 At3g60080 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.0 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.0 99.1 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.7 99.1 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.4 99.0 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.8 99.0 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
18.3 98.9 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.9 98.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.28 6e-131 470 Os11g0274700 9639.m01600 - Enoyl-CoA hydratase/isomerase domain containingprotein 2e+0 At2g26290 ARSK1 (root-specific kinase 1) C.G. S.X.
0.11 7e-11 69 Os11g0622200 AK111148.1 - Hypothetical protein 1e+0 At5g02560 HTA12 C.G. S.X.
0.04 3e-13 77 Os08g0184600 AK099057.1 - - 3e-1 At1g18650 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3) C.G. S.X.
0.04 7e-5 50 Os03g0422300 AK063543.1 - Hypothetical protein 4e-1 At1g47730 F-box family protein C.G. S.X.
0.03 1e-14 83 Os03g0365700 9631.m02443 - - 6e+0 At5g19490 DNA binding / sequence-specific DNA binding C.G. S.X.
0.03 7e-5 50 Os03g0422200 AK107232.1 - Hypothetical protein 2e+0 At3g52561 unknown protein C.G. S.X.
0.02 5e-17 91 Os07g0592000 AK107438.1 - Gibberellin regulated protein family protein 4e+0 At5g49420 MADS-box protein (AGL84) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 2e-2 42 Arabidopsis thaliana At2g44390 819046 DC1 domain-containing protein F:unknown;P:unknown;C:unknown;PO - - - C.G. S.X.
0.01 3e-2 42 Glycine max Gma.8081.1.A1_at BU545190 - - 2e-15 At3g53420 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A) C.G. S.X.
0.01 3e+0 34 Hordeum vulgare Contig708_at Contig708 - - 1e-15 At2g40205 60S ribosomal protein L41 (RPL41C) C.G. S.X.
0.01 5e-1 38 Populus trichocarpa Ptp.6229.3.S1_at CK099430 - - 6e-30 At1g01620 PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) C.G. S.X.
0.01 4e-4 48 Triticum aestivum Ta.20304.2.S1_at BE604254 - - 1e+1 At5g53592 - C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1619839_s_at CF514944 hypothetical protein LOC100251001 - 2e-1 At4g25510 unknown protein C.G. S.X.
0.01 6e-1 36 Zea mays ZmAffx.151.1.A1_at AI667841 - - 2e-10 At1g50140 ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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