CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0286800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os11g0286800 AK072702.1 - Terpene synthase family protein 8e-2 At3g45130 LAS1 S.X. H.G.
0.42 53.9 Os11g0142400 AK067423.1 - Strictosidine synthase family protein 1e-2 At2g41290 strictosidine synthase family protein S.X. H.G.
0.40 51.1 Os07g0241500 AK107239.1 - - 2e-7 At5g05860 UGT76C2 S.X. H.G.
0.36 44.0 Os12g0530100 AK109551.1 - Cationic peroxidase isozyme 40K precursor 1e-2 At5g15180 peroxidase, putative S.X. H.G.
0.35 41.7 Os06g0639800 AK060486.1 - Cytochrome P450 family protein 6e-2 At3g07565 DNA binding S.X. H.G.
0.25 24.1 Os02g0614600 AK099971.1 - - 2e+0 At2g38600 acid phosphatase class B family protein S.X. H.G.
0.23 21.2 Os04g0401100 AK061279.1 - Conserved hypothetical protein 2e+0 At5g62950 catalytic/ nucleotide binding S.X. H.G.
0.23 21.2 Os04g0505000 AK060812.1 - Plant protein of unknown function DUF869 familyprotein 9e-2 At4g21500 unknown protein S.X. H.G.
0.22 19.4 Os06g0314600 AK067321.1 - Floral nectary-specific protein 2e-1 At1g15125 S-adenosylmethionine-dependent methyltransferase/ methyltransferase S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
19.6 99.1 GSM304669 Control for the stable mutant rice line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
16.1 98.7 GSM304654 Mutant stable line (1) GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
13.3 98.4 GSM304664 Control for the stable mutant rice line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
11.1 98.2 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
10.8 98.1 GSM375769 gid2-1_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
10.7 98.1 GSM304653 Mutant stable line GSE12069 Mycroarray analyses reveal that plant mutagenesis may induce more transcriptomic changes than transgene insertion
8.4 97.7 GSM375770 gid2-1_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
8.1 97.7 GSM255763 antiOsLIC collar chip GSE12097 antiOsLIC collar chip
7.8 97.6 GSM375772 gid2-1_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
7.4 97.5 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.42 9e-64 244 Os11g0286300 9639.m01687 - Terpenoid cylases/protein prenyltransferasealpha-alpha toroid domain containing protein 3e-1 At3g11160 unknown protein C.G. S.X.
0.24 9e-27 123 Os11g0285000 AK070534.1 - Beta-amyrin synthase 3e-17 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.11 3e-11 71 Os06g0483200 AK120065.1 - Beta-amyrin synthase 7e-1 At1g78960 ATLUP2 C.G. S.X.
0.10 3e-17 89 Os02g0140400 AK106822.1 - Beta-amyrin synthase 9e-1 At4g15370 BARS1 (BARUOL SYNTHASE 1) C.G. S.X.
0.10 8e-15 81 Os02g0140200 AK066454.1 - Cycloartenol synthase (EC 5.4.99.8)(2,3-epoxysqualene--cycloartenol cyclase) 9e-1 At2g23340 AP2 domain-containing transcription factor, putative C.G. S.X.
0.09 3e-14 79 Os11g0562100 AK067451.1 - Terpene synthase family protein 5e-3 At3g45130 LAS1 C.G. S.X.
0.04 9e-27 123 Os11g0286400 AK070927.1 - Hypothetical protein 7e+0 At5g66050 - C.G. S.X.
0.01 4e-1 36 Os07g0462100 9635.m02695 - - 1e+0 At5g04090 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 8e-2 40 Arabidopsis thaliana At3g45130 823649 LAS1 F:lanosterol synthase activity;P:pentacyclic triterpenoid biosynthetic process;C:cellular_component unknown;BPOFMA - - - C.G. S.X.
0.02 7e-3 44 Glycine max Gma.6863.1.S1_at BQ628209 - - 2e-35 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.10 7e-10 65 Hordeum vulgare Contig13511_at Contig13511 - - 1e-2 At3g45130 LAS1 C.G. S.X.
0.04 5e-4 48 Populus trichocarpa PtpAffx.224583.1.S1_at pmrna43248 hypothetical protein - 2e-26 At1g78955 CAMS1 (Camelliol C synthase 1) C.G. S.X.
0.04 2e-5 52 Triticum aestivum Ta.9982.1.S1_at CA599875 - - 9e-32 At2g07050 CAS1 (cycloartenol synthase 1) C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1619935_at BQ798771 - - 7e-2 At2g34540 unknown protein C.G. S.X.
0.10 1e-14 81 Zea mays Zm.5671.1.S1_at AI629886 cycloartenol synthase - 4e+0 At5g23640 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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