CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0256900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.40 51.1 Os11g0256900 CB657230 - Hypothetical protein 3e+0 At3g52070 unknown protein S.X. H.G.
0.44 58.1 Os08g0539700 AK099855.1 - PibH8 protein 5e-1 At4g07940 unknown protein S.X. H.G.
0.42 53.9 Os08g0351200 CB677679 - Plant protein of unknown function family protein 1e+1 At4g09490 RNase H domain-containing protein S.X. H.G.
0.31 34.5 Os10g0409400 AK120091.1 - BURP domain containing protein 1e-2 At1g60390 BURP domain-containing protein / polygalacturonase, putative S.X. H.G.
0.21 17.9 Os01g0115600 AK121074.1 - LRK14 3e-1 At5g38280 PR5K S.X. H.G.
0.12 7.2 Os01g0369900 AK100034.1 - NADH:flavin oxidoreductase/NADH oxidase familyprotein 6e-3 At1g76690 OPR2 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
66.0 99.9 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
50.3 99.9 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
31.7 99.7 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
22.7 99.3 GSM173091 Rice OsSRT1 RNAi transgenic line LM1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
19.2 99.0 GSM173093 Rice OsSRT1 RNAi transgenic line LM2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
18.1 98.9 GSM173094 Rice OsSRT1 RNAi transgenic line LM3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
16.5 98.8 GSM387559 Transgenic line 22, biological rep. 1 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
12.5 98.3 GSM173080 Rice MH63 Control2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
11.7 98.2 GSM173086 Rice MH63 Control1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
11.6 98.2 GSM387561 Transgenic line 22, biological rep. 3 GSE15448 Glycinebetaine-induced water-stress tolerance in codA-expressing transgenic indica rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 3e-14 81 Os11g0260600 9639.m01430 - - 7e+0 At5g35945 unknown protein C.G. S.X.
0.07 4e-7 57 Os06g0313200 9634.m02029 - SAM dependent carboxyl methyltransferase familyprotein 9e+0 At5g01610 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e+0 34 Arabidopsis thaliana At3g52070 824370 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;P - - - C.G. S.X.
0.01 1e+0 36 Glycine max PsAffx.C2000014_at PsAffx.C2000014 - - 2e+0 At1g12663 - C.G. S.X.
0.02 5e+0 32 Hordeum vulgare Contig24674_at Contig24674 - - 1e+0 At5g53360 seven in absentia (SINA) family protein C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.56167.2.A1_a_at CV257060 hypothetical protein - 3e+0 At4g13060 F-box family protein-related C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.54303.1.S1_at CA683244 - - 4e+0 At5g35475 - C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1618824_at BQ799714 hypothetical protein LOC100268064 - 2e-4 At4g09890 unknown protein C.G. S.X.
0.02 1e+0 34 Zea mays Zm.7756.1.A1_at BQ538566 hypothetical protein LOC100279912 - 1e+0 At1g28140 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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