CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0245200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os11g0245200 9639.m01301 - Protein kinase domain containing protein 2e-8 At5g49760 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
0.31 34.5 Os10g0578200 AK110534.1 - Cellulose synthase-9 5e-41 At5g16910 CSLD2 (CELLULOSE-SYNTHASE LIKE D2) S.X. H.G.
0.29 31.1 Os05g0148900 AK120912.1 - Glutathione-S-transferase 19E50 1e+0 At1g03860 ATPHB2 (PROHIBITIN 2) S.X. H.G.
0.26 25.6 Os08g0130000 9636.m00276 - Conserved hypothetical protein 1e-11 At2g04305 magnesium transporter CorA-like protein-related S.X. H.G.
0.24 22.4 Os12g0636400 AK106721.1 - - 2e-3 At2g26750 epoxide hydrolase, putative S.X. H.G.
0.24 22.4 Os08g0203700 AK100532.1 - Protein kinase domain containing protein 2e-3 At1g56120 kinase S.X. H.G.
0.20 16.5 Os02g0575900 AK102188.1 - Exo70 exocyst complex subunit family protein 1e+0 At3g09380 - S.X. H.G.
0.20 16.5 Os02g0578300 AK105275.1 - - 2e-7 At1g22400 UGT85A1 S.X. H.G.
0.19 15.1 Os03g0188200 AK058578.1 - Zn-finger, RING domain containing protein 2e+0 At2g17055 disease resistance protein-related S.X. H.G.
0.18 13.7 Os12g0227500 9640.m01212 - Beta-glucosidase aggregating factor 9e-1 At3g15810 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
119.2 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
18.3 98.9 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
17.2 98.8 GSM262019 Nipponbare, 11 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
15.9 98.7 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
15.6 98.7 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
15.1 98.6 GSM262009 IAC165, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
11.9 98.3 GSM154941 Root_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
11.6 98.2 GSM262021 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.4 98.1 GSM262020 Nipponbare, 11 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
10.1 98.0 GSM154939 Root_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.20 1e-60 236 Os12g0210400 AK068774.1 - Protein kinase domain containing protein 7e-3 At5g49780 ATP binding / kinase/ protein serine/threonine kinase C.G. S.X.
0.06 3e-6 56 Os01g0816600 NM_191078.1 - Protein kinase domain containing protein 3e-7 At5g49780 ATP binding / kinase/ protein serine/threonine kinase C.G. S.X.
0.03 8e-10 67 Os03g0329700 CB670789 - Protein kinase domain containing protein 3e-2 At5g49770 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.03 5e-8 61 Os02g0497700 AK066155.1 - Ras-GTPase-activating protein SH3-domain bindingprotein-like 7e-2 At5g60980 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein C.G. S.X.
0.03 5e-8 61 Os12g0615100 AK067120.1 - Protein kinase domain containing protein 1e-2 At5g48740 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.03 7e-7 57 Os05g0486100 AK119823.1 - Protein kinase domain containing protein 7e-9 At5g49760 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 2e-8 61 Arabidopsis thaliana At5g49760 835039 leucine-rich repeat family protein / protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane, vacuole;MPOBFVA - - - C.G. S.X.
0.05 6e-16 87 Glycine max GmaAffx.85374.1.S1_at BI317002 - - 2e-7 At5g49760 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.17 6e-32 139 Hordeum vulgare Contig14065_at Contig14065 - - 6e-8 At5g49770 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.06 3e-14 81 Populus trichocarpa PtpAffx.74807.1.S1_at CV225788 - - 5e-11 At5g49760 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.05 7e-15 83 Triticum aestivum TaAffx.49749.1.S1_at CA639769 - - 1e-12 At1g79620 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.04 3e-14 79 Vitis vinifera 1609428_at CF215282 hypothetical protein LOC100257037 - 1e-14 At1g79620 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.02 2e-6 54 Zea mays Zm.4589.1.A1_at CA401701 Protein kinase-like - 4e-31 At3g59110 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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