CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0242400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.53 71.3 Os11g0242400 AK067025.1 - Rieske [2Fe-2S] region domain containing protein 1e-1 At1g71500 Rieske (2Fe-2S) domain-containing protein S.X. H.G.
0.88 96.8 Os01g0912700 AK068528.1 - Conserved hypothetical protein 1e-1 At2g01340 unknown protein S.X. H.G.
0.80 94.6 Os08g0162600 AK060121.1 - Rubredoxin-type Fe(Cys)4 protein family protein 6e-22 At5g17170 ENH1 (enhancer of sos3-1) S.X. H.G.
0.78 93.4 Os07g0171100 AK066475.1 - TPR-like domain containing protein 2e-16 At1g55480 binding / protein binding S.X. H.G.
0.75 91.9 Os08g0553800 AK065711.1 - Isoflavone reductase family protein 1e-25 At4g35250 vestitone reductase-related S.X. H.G.
0.71 89.6 Os02g0764500 AK066291.1 - Lhca5 protein 8e-3 At1g45474 LHCA5 S.X. H.G.
0.67 87.2 Os03g0311300 AK073167.1 - The start codon is not identified. 1e-27 At1g56500 haloacid dehalogenase-like hydrolase family protein S.X. H.G.
0.67 87.2 Os12g0420200 CB652532 - 38 kDa ribosome-associated protein 1e+0 At1g31250 proline-rich family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
16.0 98.7 GSM174883 A mock 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
15.0 98.6 GSM174887 D FR13 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
14.9 98.6 GSM174888 C mock 3 dpi rep 2 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
13.6 98.5 GSM174885 B FR13 3 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
7.6 97.5 GSM421701 XOO, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.9 97.3 GSM174884 E mock 4 dpi rep 1 with array type rice from Affymetrix GSE7256 Identification of rice genes differentially expressed upon virulent infection by Magnaporthe grisea
6.9 97.3 GSM421681 XOC, 24 hai - rep3 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.4 97.2 GSM421683 XOC, 96 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.3 97.2 GSM421719 MOCK, 24 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
6.2 97.1 GSM421720 MOCK, 24 hai - rep2 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 5e-3 44 Os04g0692500 AK101528.1 - Conserved hypothetical protein 8e-8 At2g32230 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 5e-3 44 Os05g0228201 AK101528.1 - - 8e-8 At2g32230 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.01 3e-1 38 Os03g0281900 AK072135.1 - ABC transporter related domain containing protein 3e-1 At3g53510 ABC transporter family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 38 Arabidopsis thaliana At1g71500 843491 Rieske (2Fe-2S) domain-containing protein F:electron carrier activity, oxidoreductase activity, 2 iron, 2 sulfur cluster binding;P:oxidation reduction;C:chloroplast thylakoid membrane, chloroplast, chloroplast envelope;BPO - - - C.G. S.X.
0.25 7e-26 119 Glycine max Gma.13002.1.S1_at CD418167 - - 1e-7 At1g71500 Rieske (2Fe-2S) domain-containing protein C.G. S.X.
0.50 1e-154 545 Hordeum vulgare Contig8096_at Contig8096 - - 4e-8 At1g71500 Rieske (2Fe-2S) domain-containing protein C.G. S.X.
0.31 4e-18 93 Populus trichocarpa PtpAffx.100443.1.S1_at CV283450 hypothetical protein - 2e-16 At1g71500 Rieske (2Fe-2S) domain-containing protein C.G. S.X.
0.48 4e-156 551 Triticum aestivum Ta.7769.1.A1_at BQ171706 - - 1e-8 At1g71500 Rieske (2Fe-2S) domain-containing protein C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1616432_at CB835164 - - 1e+0 At2g36820 - C.G. S.X.
0.02 2e-1 36 Zea mays Zm.4793.4.A1_x_at BM340717 hypothetical protein LOC100193376 - 7e-5 At3g10860 ubiquinol-cytochrome C reductase complex ubiquinone-binding protein, putative / ubiquinol-cytochrome C reductase complex 8.2 kDa protein, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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