CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0242100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os11g0242100 AK069387.1 - Protein of unknown function DUF608 domaincontaining protein 8e-12 At5g49900 catalytic/ glucosylceramidase S.X. H.G.
0.36 44.0 Os12g0600400 AK066514.1 - Pyridoxal kinase (EC 2.7.1.35) (Pyridoxine kinase)(Pyridoxal kinase- like protein SOS4) (Salt overlysensitive 4) 4e-21 At5g37850 SOS4 (SALT OVERLY SENSITIVE 4) S.X. H.G.
0.19 15.1 Os01g0655800 AK067776.1 - Acyl-CoA synthetase (EC 6.2.1.3) 4e-25 At4g11030 long-chain-fatty-acid--CoA ligase, putative / long-chain acyl-CoA synthetase, putative S.X. H.G.
0.18 13.7 Os04g0519900 AK071665.1 - Hypothetical protein 3e-2 At4g09960 STK (SEEDSTICK) S.X. H.G.
0.18 13.7 Os06g0714000 AK069538.1 - Protein of unknown function UPF0183 family protein 1e-6 At3g51130 unknown protein S.X. H.G.
0.11 6.5 Os06g0103500 AK060849.1 - Acyl-CoA oxidase (EC 1.3.3.6) 1e-50 At4g16760 ACX1 (ACYL-COA OXIDASE 1) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.6 98.4 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
8.0 97.6 GSM195226 Root GSE7951 Genome-wide gene expression profiling of rice stigma
5.3 96.7 GSM255763 antiOsLIC collar chip GSE12097 antiOsLIC collar chip
4.5 96.3 GSM255762 wt collar chip GSE12097 antiOsLIC collar chip
3.8 95.7 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
3.7 95.6 GSM262011 Nipponbare, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
3.5 95.3 GSM357122 14-day-old seedling, rep 1 GSE14275 Expression data for heat shock in rice seedlings
3.4 95.2 GSM262006 IAC165, 11 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
3.4 95.2 GSM359912 IR29 root, salt-treated, biological replicate 3 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
3.2 94.9 GSM261998 IAC165, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-3 46 Os05g0426800 9633.m03275 - Conserved hypothetical protein 5e-6 At1g09812 unknown protein C.G. S.X.
0.01 9e-7 57 Os07g0444000 AK070141.1 - Protein of unknown function DUF608 domaincontaining protein 1e-20 At3g24180 catalytic/ glucosylceramidase C.G. S.X.
0.01 9e-4 48 Os05g0355300 CF309035 - Zn-finger, RING domain containing protein 2e-4 At5g63650 SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5) C.G. S.X.
0.01 9e-4 48 Os10g0473400 AK067795.1 - Protein of unknown function DUF608 domaincontaining protein 1e-29 At3g24180 catalytic/ glucosylceramidase C.G. S.X.
0.01 9e-4 48 Os12g0573800 AK106961.1 - Hypothetical protein 5e-2 At1g04778 unknown protein C.G. S.X.
0.01 3e-3 46 Os07g0188700 AK073755.1 - Exostosin-like family protein 2e-2 At5g03795 - C.G. S.X.
0.01 3e-3 46 Os09g0446300 9637.m02401 - - 2e-5 At1g06475 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 8e-12 73 Arabidopsis thaliana At5g49900 835053 catalytic/ glucosylceramidase F:catalytic activity, glucosylceramidase activity;P:glucosylceramide catabolic process, sphingolipid metabolic process;C:integral to membrane, membrane;BPMOA - - - C.G. S.X.
0.16 1e-20 103 Glycine max GmaAffx.19904.1.S1_at BU761513 - - 1e-33 At5g49900 catalytic/ glucosylceramidase C.G. S.X.
0.28 3e-136 486 Hordeum vulgare Contig13060_at Contig13060 - - 5e-10 At4g10060 catalytic/ glucosylceramidase C.G. S.X.
0.19 3e-24 115 Populus trichocarpa Ptp.6068.1.S1_s_at DN486901 hypothetical protein - 2e-38 At5g49900 catalytic/ glucosylceramidase C.G. S.X.
0.32 9e-129 462 Triticum aestivum Ta.20469.1.S1_at CA642463 - - 1e-14 At5g49900 catalytic/ glucosylceramidase C.G. S.X.
0.06 2e-3 44 Vitis vinifera 1618000_at CD721411 - - 2e-55 At3g24180 catalytic/ glucosylceramidase C.G. S.X.
0.49 0 1275 Zea mays Zm.18304.1.S1_at CO522721 - - 6e-14 At5g49900 catalytic/ glucosylceramidase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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