CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0239000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.43 55.4 Os11g0239000 9639.m01244 - - 1e+1 At1g80610 unknown protein S.X. H.G.
0.60 79.7 Os01g0260300 9629.m01542 - - 1e-1 At5g05230 ubiquitin-protein ligase S.X. H.G.
0.60 79.7 Os11g0308700 9639.m01908 - - 6e-1 At4g33350 chloroplast inner membrane import protein Tic22, putative S.X. H.G.
0.60 79.7 Os05g0255200 9633.m01478 - - 7e+0 At4g09260 unknown protein S.X. H.G.
0.46 60.9 Os10g0331500 AK060146.1 - Conserved hypothetical protein 2e+0 At2g29740 UGT71C2 (UDP-GLUCOSYL TRANSFERASE 71C2) S.X. H.G.
0.44 58.1 Os04g0348200 9632.m02648 - - 2e+0 At5g35300 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
51.3 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.7 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.2 99.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.3 99.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.0 99.3 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377079 Genomic DNA - 45 day old leaf sample - mutant g6686 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.2 99.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 1e-9 65 Os11g0224500 9639.m01117 - - 2e+0 At3g54560 HTA11 C.G. S.X.
0.07 9e-8 59 Os11g0231200 9639.m01189 - - 3e+0 At1g15230 unknown protein C.G. S.X.
0.05 9e-8 59 Os01g0765400 AK106246.1 - Proteinase inhibitor I4, serpin family protein 3e+0 At1g70895 CLE17 (CLAVATA3/ESR-RELATED 17) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e+1 32 Arabidopsis thaliana At1g80610 844400 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMF - - - C.G. S.X.
0.02 9e-1 36 Glycine max PsAffx.psHB027xB22f_at PsAffx.psHB027xB22f - - 4e+0 At5g39210 CRR7 (CHLORORESPIRATORY REDUCTION 7) C.G. S.X.
0.02 3e-1 36 Hordeum vulgare HV_CEb0008E13r2_at HV_CEb0008E13r2 - - 3e-1 At5g41440 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.219048.1.S1_at pmrna34846 hypothetical protein - 5e-2 At1g61470 CCR4-NOT transcription complex protein, putative C.G. S.X.
0.05 1e-2 42 Triticum aestivum Ta.1638.1.S1_at CD452555 - - 1e+0 At1g14800 - C.G. S.X.
0.02 8e-1 34 Vitis vinifera 1611086_at CF415431 hypothetical protein LOC100249245 - 3e-13 At5g23940 EMB3009 (embryo defective 3009) C.G. S.X.
0.02 7e-2 38 Zea mays Zm.12031.1.A1_at BM382777 - - 2e+1 At5g05650 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage