CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0224300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os11g0224300 AK106705.1 - Integrase, catalytic region domain containingprotein 6e+0 At3g02180 SP1L3 (SPIRAL 1-LIKE3) S.X. H.G.
0.20 16.5 Os04g0474600 9632.m03783 - Beta-primeverosidase (EC 3.2.1.149) 5e-5 At5g42260 BGLU12 (BETA GLUCOSIDASE 12) S.X. H.G.
0.13 8.2 Os04g0688600 AK070680.1 - Anionic peroxidase precursor 3e-1 At5g40150 peroxidase, putative S.X. H.G.
0.11 6.5 Os05g0372000 AK100218.1 - Conserved hypothetical protein 8e-2 At5g16510 reversibly glycosylated polypeptide, putative S.X. H.G.
0.09 4.9 Os12g0228400 AK120234.1 - Chaperonin CPN60-1, mitochondrial precursor(HSP60-1) 3e-2 At3g23990 HSP60 (HEAT SHOCK PROTEIN 60) S.X. H.G.
0.04 2.0 Os01g0301700 AK100563.1 - TPR-like domain containing protein 5e+0 At5g02780 In2-1 protein, putative S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
50.3 99.9 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
28.0 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.8 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.0 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.1 99.3 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.7 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.43 0 1170 Os09g0375700 AK068295.1 - Hypothetical protein 6e+0 At2g40290 eukaryotic translation initiation factor 2 subunit 1, putative / eIF-2A, putative / eIF-2-alpha, putative C.G. S.X.
0.36 0 1945 Os07g0137500 AK119401.1 - Conserved hypothetical protein 2e+0 At4g17530 ATRAB1C C.G. S.X.
0.16 0 795 Os11g0183200 AK069881.1 - Conserved hypothetical protein 2e-1 At1g54330 ANAC020 (Arabidopsis NAC domain containing protein 20) C.G. S.X.
0.15 2e-161 571 Os01g0392600 AK067469.1 - Hypothetical protein 9e+0 At5g60130 transcriptional factor B3 family protein C.G. S.X.
0.15 1e-10 69 Os02g0522100 AK100876.1 - Conserved hypothetical protein 5e+0 At5g39850 40S ribosomal protein S9 (RPS9C) C.G. S.X.
0.08 3e-130 468 Os01g0668900 AK110235.1 - Conserved hypothetical protein 5e-1 At4g13160 unknown protein C.G. S.X.
0.05 9e-12 73 Os09g0250500 AK062954.1 - Hypothetical protein 2e+0 At3g36659 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.02 2e-3 46 Os01g0758700 AK106605.1 - Hypothetical protein 1e+0 At2g22990 SNG1 (SINAPOYLGLUCOSE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e+0 34 Arabidopsis thaliana At3g02180 821277 SP1L3 (SPIRAL 1-LIKE3) SPIRAL1-LIKE3 belongs to a six-member gene family in Arabidopsis; all members share high sequence similarity in amino- and carboxy-terminal regions. Regulates cortical microtubule organization. Mutant plants exhibit altered patterns of root, leaf and petal growth as a result of defective anisotropic cell expansion. - - - C.G. S.X.
0.01 9e-3 44 Glycine max Gma.6704.1.S1_at BQ741597 bZIP transcription factor bZIP131 - 2e-2 At2g31370 bZIP transcription factor (POSF21) C.G. S.X.
0.01 2e-1 38 Hordeum vulgare Contig4253_at Contig4253 - - 3e+0 At2g26695 binding / zinc ion binding C.G. S.X.
0.01 1e-1 40 Populus trichocarpa PtpAffx.217414.1.S1_at pmrna32666 hypothetical protein - 3e+0 At5g65590 Dof-type zinc finger domain-containing protein C.G. S.X.
0.01 7e-3 44 Triticum aestivum TaAffx.70061.14.A1_at CA680384 - - 4e+0 At2g16510 vacuolar ATP synthase 16 kDa proteolipid subunit 5 / V-ATPase 16 kDa proteolipid subunit 5 (AVAP5) C.G. S.X.
0.01 7e+0 32 Vitis vinifera 1621451_at CD005813 - - 5e+0 At3g23633 - C.G. S.X.
0.01 7e-1 36 Zea mays Zm.3798.1.S1_at CA827132 - - 1e-1 At1g68430 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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