CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0215200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os11g0215200 9639.m01036 - - 5e-2 At4g19270 unknown protein S.X. H.G.
0.63 82.7 Os01g0889101 NM_190210.1 - - 1e-3 At3g17160 unknown protein S.X. H.G.
0.60 79.7 Os11g0485100 9639.m02666 - - 4e+0 At3g13700 RNA-binding protein, putative S.X. H.G.
0.50 68.0 Os10g0153800 NM_194912.1 - - 2e-1 At2g02440 unknown protein S.X. H.G.
0.33 38.8 Os07g0664900 XM_354050.1 - - 1e+0 At5g38980 unknown protein S.X. H.G.
0.20 16.5 Os06g0110600 NM_185383.1 - - 4e-1 At5g38300 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
49.3 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
30.7 99.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.8 99.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.4 99.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.9 99.6 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.5 99.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.3 99.5 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-4 46 Os06g0266800 AK062516.1 - GAST1 protein precursor 1e-1 At5g15230 GASA4 (GAST1 PROTEIN HOMOLOG 4) C.G. S.X.
0.03 2e-6 54 Os02g0523800 AK072296.1 - Inositol polyphosphate kinase family protein 5e-5 At5g61760 ATIPK2BETA C.G. S.X.
0.03 3e-5 50 Os05g0115100 AK106226.1 - Eukaryotic DNA topoisomerases I, dispensableinsert domain containing protein 4e-2 At1g02965 unknown protein C.G. S.X.
0.02 4e-4 46 Os03g0343700 AK102274.1 - Brix domain containing protein 5e-2 At5g61770 PPAN (PETER PAN-LIKE PROTEIN) C.G. S.X.
0.01 7e-6 52 Os06g0186600 AK099819.1 - Conserved hypothetical protein 2e-16 At4g30780 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 5e-2 38 Arabidopsis thaliana At4g19270 827667 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;PO - - - C.G. S.X.
0.07 7e-2 38 Glycine max GmaAffx.53612.1.A1_at BE583680 - - 3e+0 At5g17165 unknown protein C.G. S.X.
0.04 2e-3 42 Hordeum vulgare Contig11780_at Contig11780 - - 1e+0 At1g64690 unknown protein C.G. S.X.
0.04 1e+0 34 Populus trichocarpa PtpAffx.454.37.A1_a_at CV225454 hypothetical protein - 1e+0 At1g66200 ATGSR2 C.G. S.X.
0.07 1e-2 40 Triticum aestivum TaAffx.11894.1.S1_at BJ315515 - - 4e-1 At4g19270 unknown protein C.G. S.X.
0.07 9e-1 32 Vitis vinifera 1620940_at CF201899.1 - - 2e+1 At5g66990 RWP-RK domain-containing protein C.G. S.X.
0.04 8e-2 36 Zea mays Zm.8576.1.A1_at BM074724 caffeic acid 3-O-methyltransferase - 4e-2 At5g54160 ATOMT1 (O-METHYLTRANSFERASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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