Gene omics information

Query gene ID	Os11g0186900
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.9	Os11g0186900	AK105491.1	-	1-aminocyclopropane-1-carboxylate oxidase	2e-13	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.80	94.6	Os08g0113000	AK069503.1	-	Peroxidase 47 precursor (EC 1.11.1.7) (AtperoxP47) (ATP32)	3e-3	At5g40150	peroxidase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.77	93.1	Os03g0149300	BU673570	-	Protein of unknown function DUF6 domain containingprotein	2e+0	At4g10595	LCR2 (Low-molecular-weight cysteine-rich 2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.61	81.2	Os11g0700500	AK111626.1	-	Myb, DNA-binding domain containing protein	1e-8	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os04g0188500	9632.m00978	-	Hypothetical protein	6e-1	At2g18870	VEL3 (VERNALIZATION5/VIN3-LIKE)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	51.1	Os11g0152700	AK102690.1	-	Transcription factor HBP-1b(C38) (Fragment)	3e-1	At1g77920	bZIP family transcription factor	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
22.1	99.3	GSM262005	IAC165, 4 days after infection with S. hermonthica, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
19.9	99.1	GSM262014	Nipponbare, 4 days after mock-infection, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
15.3	98.7	GSM262015	Nipponbare, 4 days after mock-infection, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.3	98.6	GSM262018	Nipponbare, 11 days after mock-infection, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
14.0	98.5	GSM261999	IAC165, 2 days after mock-infection, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.8	98.5	GSM262013	Nipponbare, 2 days after infection with S. hermonthica, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.6	98.5	GSM262019	Nipponbare, 11 days after mock-infection, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
13.4	98.5	GSM262017	Nipponbare, 4 days after infection with S. hermonthica, biological replicate #2	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.8	98.4	GSM262004	IAC165, 4 days after infection with S. hermonthica, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
12.5	98.3	GSM262016	Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1	GSE10373	Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.11	8e-30	133	Os09g0451000	AK065039.1	-	1-aminocyclopropane-1-carboxylate oxidase 1 (EC1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme)(EFE)	1e-11	At1g12010	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.10	5e-31	137	Os09g0451400	AK058296.1	-	1-aminocyclopropapne-1-carboxylic acid oxidase	4e-12	At1g12010	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.09	3e-32	141	Os02g0771600	AF049889.1	-	1-aminocyclopropane-1-carboxylate oxidase 1 (EC1.14.17.4) (ACC oxidase 1) (Ethylene-forming enzyme)(EFE)	7e-9	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.06	3e-20	101	Os01g0580500	AK102472.1	-	1-aminocyclopropane-1-carboxylate oxidase(Fragment)	3e-12	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	6e-6	54	Os01g0935400	NM_190055.1	-	2OG-Fe(II) oxygenase domain containing protein	1e-1	At3g21420	oxidoreductase, 2OG-Fe(II) oxygenase family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.04	2e-13	77	Arabidopsis thaliana	At1g05010	839345	EFE (ETHYLENE-FORMING ENZYME)	Encodes 1-aminocyclopropane-1-carboxylate oxidase	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	3e-1	38	Glycine max	GmaAffx.74923.1.S1_at	BU965066	-	-	3e-3	At2g31560	unknown protein	C.G.	S.X.	Please select
0.27	2e-24	113	Hordeum vulgare	Contig2639_at	Contig2639	-	-	1e-2	At1g12010	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	C.G.	S.X.	Please select
0.06	4e-3	44	Populus trichocarpa	Ptp.1479.1.S1_at	AY167040.1	1-aminocyclopropane-1-carboxylate	-	2e-13	At1g77330	1-aminocyclopropane-1-carboxylate oxidase, putative / ACC oxidase, putative	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.56	2e-174	613	Triticum aestivum	Ta.18698.1.S1_at	CA640836	-	-	1e-5	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	C.G.	S.X.	Please select
0.02	9e-1	34	Vitis vinifera	1612528_at	CB982094	-	-	2e-12	At5g24530	DMR6 (DOWNY MILDEW RESISTANT 6)	C.G.	S.X.	Please select
0.27	2e-18	93	Zea mays	Zm.7909.1.A1_at	BM080388	hypothetical protein LOC100273458	-	3e-1	At1g05010	EFE (ETHYLENE-FORMING ENZYME)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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