CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0157200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.97 99.9 Os11g0157200 AK070326.1 - Harpin-induced 1 domain containing protein 1e-4 At3g52470 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein S.X. H.G.
0.30 32.7 Os08g0558600 AK066924.1 - Vesicle-associated membrane protein 727(AtVAMP727) 6e-7 At3g54300 ATVAMP727 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 727) S.X. H.G.
0.30 32.7 Os05g0121000 AK058867.1 - Protein of unknown function DUF1218 family protein 6e-1 At2g20030 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.28 31.1 Os03g0151900 AB032761.1 - Small GTP-binding protein 1e-32 At3g54840 ARA6 S.X. H.G.
0.23 21.2 Os01g0182200 AK109424.2 - Small basic membrane integral protein ZmSIP1-2 4e-11 At3g04090 SIP1A (SMALL AND BASIC INTRINSIC PROTEIN 1A) S.X. H.G.
0.22 19.4 Os02g0590800 AK060204.1 - Protein kinase domain containing protein 1e-12 At3g20860 ATNEK5 (NIMA-RELATED KINASE5) S.X. H.G.
0.21 17.9 Os01g0248400 AK072762.1 - NADP-dependent isocitrate dehydrogenase 2e-38 At1g54340 ICDH (ISOCITRATE DEHYDROGENASE) S.X. H.G.
0.17 12.6 Os01g0589500 AB110176.1 - - 1e-1 At3g12130 KH domain-containing protein / zinc finger (CCCH type) family protein S.X. H.G.
0.16 11.3 Os02g0174200 AK101327.1 - Protein kinase domain containing protein 4e-9 At2g24360 serine/threonine/tyrosine kinase, putative S.X. H.G.
0.16 11.3 Os01g0111900 AK103326.1 - Conserved hypothetical protein 1e-1 At3g06750 hydroxyproline-rich glycoprotein family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.4 97.5 GSM195218 stigma 1, biological rep1 GSE7951 Genome-wide gene expression profiling of rice stigma
7.1 97.4 GSM195219 stigma 2, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
6.6 97.3 GSM195220 stigma 3, biological rep 2 GSE7951 Genome-wide gene expression profiling of rice stigma
6.4 97.2 GSM159211 Seed (S2, 3 - 4 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
5.4 96.8 GSM159204 Inflorescence (P6, 22 - 30 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
5.3 96.7 GSM159210 Seed (S2, 3 - 4 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
4.7 96.4 GSM159212 Seed (S2, 3 - 4 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
4.6 96.3 GSM159198 Inflorescence (P4, 10 - 15 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
4.4 96.2 GSM159205 Inflorescence (P6, 22 - 30 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
4.0 95.9 GSM159200 Inflorescence (P4, 10 - 15 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.24 1e-18 95 Os02g0538700 AK109402.2 - Harpin-induced 1 domain containing protein 2e+0 At2g01060 myb family transcription factor C.G. S.X.
0.11 1e-3 46 Os08g0102700 AK099239.1 - Harpin-induced 1 domain containing protein 1e-2 At3g42310 unknown protein C.G. S.X.
0.07 3e-19 97 Os04g0416700 AK068271.1 - Harpin-induced 1 domain containing protein 2e+0 At1g73480 hydrolase, alpha/beta fold family protein C.G. S.X.
0.07 5e-15 83 Os04g0685400 AK103610.1 - Harpin-induced 1 domain containing protein 3e+0 At2g48090 unknown protein C.G. S.X.
0.02 2e-2 42 Os10g0158100 9638.m00617 - Senescence-associated protein 15 2e-8 At1g01120 KCS1 (3-KETOACYL-COA SYNTHASE 1) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 1e-4 48 Arabidopsis thaliana At3g52470 824412 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein F:unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.04 8e-7 56 Glycine max Gma.11284.1.S1_at AW153035 - - 2e-4 At2g35960 NHL12 C.G. S.X.
0.54 1e-154 545 Hordeum vulgare Contig6587_s_at Contig6587 - - 1e-4 At3g52470 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.209174.1.S1_at pmrna18161 - - 1e+0 At1g08845 structural constituent of ribosome C.G. S.X.
0.48 2e-160 565 Triticum aestivum Ta.1514.1.S1_x_at BJ263548 - - 2e-4 At3g52470 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
0.03 2e-3 42 Vitis vinifera 1616537_at CF212796 hypothetical protein LOC100244754 - 3e-1 At3g45020 50S ribosomal protein-related C.G. S.X.
0.48 3e-90 331 Zea mays Zm.15385.1.A1_at BM378219 VAMP protein SEC22 - 5e-4 At3g52470 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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