CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0150900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.63 82.7 Os11g0150900 9639.m00449 - - 5e-4 At3g52870 calmodulin-binding family protein S.X. H.G.
0.33 38.8 Os07g0230500 9635.m01249 - Excinuclease ABC, C subunit, N-terminal domaincontaining protein 4e-8 At2g30350 endo/excinuclease amino terminal domain-containing protein S.X. H.G.
0.21 17.9 Os06g0140300 AK100368.1 - Leucine-rich repeat, plant specific containingprotein 1e-1 At3g09770 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.15 10.3 Os02g0825500 AK068122.1 - Cyclin-like F-box domain containing protein 3e-1 At5g40310 exonuclease family protein S.X. H.G.
0.10 5.7 Os01g0164800 AK064572.1 - Hypothetical protein 4e-2 At5g03720 AT-HSFA3 S.X. H.G.
0.01 0.5 Os02g0317500 AK102355.1 - Cyclin-like F-box domain containing protein 4e-2 At1g73440 calmodulin-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
75.3 99.9 GSM195224 Suspension cell GSE7951 Genome-wide gene expression profiling of rice stigma
58.7 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.2 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.7 98.5 GSM99874 TCHW P17_agami salt stress, biological rep2 GSE4438 Expression data from rice under salinity stress
12.2 98.3 GSM302915 emb6D_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
11.8 98.3 GSM302914 emb6D_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
11.1 98.2 GSM195228 Embryo GSE7951 Genome-wide gene expression profiling of rice stigma
10.8 98.1 GSM99870 TCHW P13_agami control, biological rep1 GSE4438 Expression data from rice under salinity stress
10.2 98.0 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.2 97.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.49 0 995 Os03g0164400 AK063366.1 - FAR1 domain containing protein 1e+0 At4g24980 - C.G. S.X.
0.38 0 1039 Os12g0149900 AK072203.1 - IQ calmodulin-binding region domain containingprotein 4e-3 At2g26190 calmodulin-binding family protein C.G. S.X.
0.16 2e-11 73 Os02g0262500 9630.m01526 - - 1e+0 At4g18950 ankyrin protein kinase, putative C.G. S.X.
0.14 1e-21 107 Os02g0467100 9630.m02530 - - 8e-1 At3g26880 self-incompatibility protein-related C.G. S.X.
0.12 2e-20 103 Os08g0555501 9636.m04501 - - 2e+0 At2g23970 defense-related protein, putative C.G. S.X.
0.12 7e-14 81 Os02g0604600 9630.m03772 - - 6e-1 At1g49050 aspartyl protease family protein C.G. S.X.
0.05 1e-9 67 Os05g0197300 AK106389.1 - IQ calmodulin-binding region domain containingprotein 2e-5 At2g26190 calmodulin-binding family protein C.G. S.X.
0.02 1e-9 67 Os11g0686600 9639.m04281 - - 1e+0 At1g77030 ATP binding / ATP-dependent helicase/ RNA binding / helicase/ hydrolase, acting on acid anhydrides, in phosphorus-containing anhydrides / nucleic acid binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-4 48 Arabidopsis thaliana At3g52870 824453 calmodulin-binding family protein F:calmodulin binding;P:biological_process unknown;C:cellular_component unknown;PFBO - - - C.G. S.X.
0.01 7e-4 48 Glycine max GmaAffx.78280.1.S1_at BM528755 - - 6e-5 At3g52870 calmodulin-binding family protein C.G. S.X.
0.16 5e-67 256 Hordeum vulgare Contig18490_at Contig18490 - - 7e-5 At3g52870 calmodulin-binding family protein C.G. S.X.
0.04 3e-3 46 Populus trichocarpa PtpAffx.206453.1.S1_at pmrna12804 hypothetical protein - 1e-23 At3g58480 calmodulin-binding family protein C.G. S.X.
0.30 3e-113 410 Triticum aestivum Ta.13245.1.S1_x_at BQ170197 - - 1e-2 At3g52870 calmodulin-binding family protein C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1616828_s_at CD799685 similar to Os03g0670700 - 1e+0 At4g38680 GRP2 (GLYCINE RICH PROTEIN 2) C.G. S.X.
0.09 5e-33 143 Zea mays Zm.9998.1.A1_at BM335619 - - 3e-1 At5g57010 calmodulin-binding family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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