CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0142950

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os11g0142950 9640.m00363 - - 3e-1 At2g25130 armadillo/beta-catenin repeat family protein S.X. H.G.
0.91 98.9 Os09g0494001 9637.m02805 - - 2e-1 At2g39855 unknown protein S.X. H.G.
0.77 93.1 Os06g0106200 9634.m00069 - - 2e+0 At5g22280 unknown protein S.X. H.G.
0.67 87.2 Os12g0527400 9640.m03310 - - 8e-1 At4g05400 unknown protein S.X. H.G.
0.63 82.7 Os06g0344500 9634.m02330 - - 3e+0 At5g59030 COPT1 (copper transporter 1) S.X. H.G.
0.50 68.0 Os08g0368300 9636.m02778 - - 3e+0 At4g10720 ankyrin repeat family protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
114.2 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
89.7 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
18.2 98.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.9 98.9 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.9 98.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.4 98.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.0 98.6 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.7 98.6 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.5 98.6 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
14.3 98.6 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 4e-5 50 Os12g0139000 9639.m00380 - - 2e+0 At4g25500 ATRSP35 C.G. S.X.
0.05 1e-2 42 Os12g0134800 9640.m00324 - - 1e+0 At3g12740 ALIS1 (ALA-INTERACTING SUBUNIT 1) C.G. S.X.
0.03 1e-5 52 Os08g0487500 AK066326.1 - Zn-finger, RING domain containing protein 2e-1 At3g17160 unknown protein C.G. S.X.
0.03 2e-4 48 Os06g0201000 AK108188.1 - Conserved hypothetical protein 2e+0 At1g35900 unknown protein C.G. S.X.
0.03 3e-3 44 Os12g0466800 AK070991.1 - Hypothetical protein 1e-1 At1g25300 octicosapeptide/Phox/Bem1p (PB1) domain-containing protein C.G. S.X.
0.02 1e-5 52 Os12g0467200 AK107289.1 - Conserved hypothetical protein 2e-2 At5g41200 AGL75 (AGAMOUS-LIKE 75) C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 3e-1 36 Arabidopsis thaliana At2g25130 817051 armadillo/beta-catenin repeat family protein F:binding;P:unknown;C:chloroplast;PMFO - - - C.G. S.X.
0.03 1e-1 38 Glycine max PsAffx.psMY010iA11r_at PsAffx.psMY010iA11r - - 1e+1 At4g38790 ER lumen protein retaining receptor family protein C.G. S.X.
0.04 4e-2 38 Hordeum vulgare Contig18584_at Contig18584 - - 5e+0 Atmg00620 - C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.203128.1.S1_at pmrna6204 hypothetical protein - 2e-1 At1g62240 unknown protein C.G. S.X.
0.07 1e-7 57 Triticum aestivum TaAffx.118823.1.A1_at CK208374 - - 2e+0 At5g14390 - C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1617295_at CB347433 - - 9e+0 At5g66690 UGT72E2 C.G. S.X.
0.04 4e-2 38 Zea mays Zm.6017.1.A1_at AI666208 hypothetical protein LOC100274747 /// hypothetical protein LOC100277021 - 2e+0 At4g08230 glycine-rich protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage