CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0138225

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os11g0138225 9639.m00338 - - 1e+1 At5g16980 NADP-dependent oxidoreductase, putative S.X. H.G.
0.71 89.6 Os09g0117301 9637.m00131 - - 2e+0 At2g22460 unknown protein S.X. H.G.
0.67 87.2 Os04g0265400 9632.m01771 - - 9e+0 At1g32920 unknown protein S.X. H.G.
0.61 81.2 Os08g0275400 9636.m01744 - - 1e+0 At5g50740 metal ion binding S.X. H.G.
0.57 77.0 Os05g0287100 9633.m01925 - - 9e+0 At5g27541 S.X. H.G.
0.46 60.9 Os03g0601400 9631.m03890 - - 5e+0 At5g06470 glutaredoxin family protein S.X. H.G.
0.44 58.1 Os01g0367800 NM_193806.1 - - 3e-1 At5g09310 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.4 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.1 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.8 99.6 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
26.6 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.6 99.5 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.7 99.4 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.5 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Os08g0383901 9636.m02930 - - 2e+0 At2g21970 SEP2 (STRESS ENHANCED PROTEIN 2) C.G. S.X.
0.02 3e-1 38 Os08g0519900 9636.m04138 - Exo70 exocyst complex subunit family protein 7e-2 At2g32890 RALFL17 (RALF-LIKE 17) C.G. S.X.
0.02 1e+0 36 Os11g0573200 AK059001.1 - Gag polyprotein (Fragment) 3e+0 At3g15780 unknown protein C.G. S.X.
0.01 9e-2 40 Os03g0186900 AK062232.1 - Peptidase A1, pepsin family protein 9e-7 At1g09750 chloroplast nucleoid DNA-binding protein-related C.G. S.X.
0.01 3e-1 38 Os02g0689800 AK120785.1 - Helicase, C-terminal domain containing protein 2e-22 At3g12810 PIE1 (PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1) C.G. S.X.
0.01 3e-1 38 Os03g0224300 AK100541.1 - Glycosyl transferase, family 20 domain containingprotein 7e-9 At1g68020 ATTPS6 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 1e+1 32 Arabidopsis thaliana At5g16980 831561 NADP-dependent oxidoreductase, putative F:oxidoreductase activity, binding, catalytic activity, zinc ion binding;P:response to oxidative stress, response to cyclopentenone;C:unknown;BOFMPA - - - C.G. S.X.
0.02 2e-1 38 Glycine max GmaAffx.83290.1.S1_at CA853059 - - 3e-14 At3g54610 GCN5 C.G. S.X.
0.02 9e-2 38 Hordeum vulgare Contig13226_s_at Contig13226 - - 2e-1 At2g34620 mitochondrial transcription termination factor-related / mTERF-related C.G. S.X.
0.02 4e+0 34 Populus trichocarpa PtpAffx.133105.1.S1_at CX175170 - - 2e+0 At2g45380 - C.G. S.X.
0.02 2e-1 38 Triticum aestivum Ta.14152.2.S1_at CA699208 - - 4e+0 At1g01820 PEX11C (PEROXIN 11C) C.G. S.X.
0.02 3e+0 32 Vitis vinifera 1622667_at CF568939 - - 1e+0 At3g27329 - C.G. S.X.
0.02 3e-1 36 Zea mays Zm.4583.1.A1_at AI737217 hypothetical protein LOC100280399 - 1e-6 At5g37780 CAM1 (CALMODULIN 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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