CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os11g0114700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os11g0114700 AK070834.1 - PAP/25A core domain containing protein 4e-23 At3g51620 - S.X. H.G.
0.63 82.7 Os12g0618300 AK103368.1 - GTP-binding protein-like (Fragment) 1e-37 At2g27200 GTP-binding family protein S.X. H.G.
0.61 81.2 Os04g0488000 AK111619.1 - PITSLRE serine/threonine-protein kinase CDC2L1 (EC2.7.1.37) (Galactosyltransferase associated proteinkinase p58/GTA) (Cell division cycle 2-like 1) 2e-71 At1g67580 protein kinase family protein S.X. H.G.
0.57 77.0 Os03g0211100 AK111910.1 - - 7e-10 At3g29270 ubiquitin-protein ligase S.X. H.G.
0.50 68.0 Os07g0690300 AK099674.1 - Zn-finger, RING domain containing protein 5e-10 At3g05670 PHD finger family protein S.X. H.G.
0.38 46.9 Os08g0333000 AK108356.1 - F7O18.23 protein (SWP1) (Struwwelpeter 1 protein) 1e-25 At3g04740 SWP (STRUWWELPETER) S.X. H.G.
0.30 32.7 Os09g0514900 AK102371.1 - Protein of unknown function DUF654 family protein 2e-2 At2g46900 - S.X. H.G.
0.26 25.6 Os07g0461600 AK121366.1 - TA7 protein (Fragment) 1e+0 At2g19890 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
4.7 96.4 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
4.7 96.4 GSM302922 seedling_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
4.6 96.3 GSM302923 seedling_rep2 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
4.2 96.0 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.9 95.8 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
3.8 95.7 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.5 95.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
3.4 95.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.3 95.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
3.3 95.1 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 6e-8 61 Os12g0283100 AK109925.1 - DNA polymerase, beta-like region domain containingprotein 4e-1 At3g61690 unknown protein C.G. S.X.
0.03 1e-6 57 Os03g0336700 AK120611.1 - PAP/25A core domain containing protein 1e-4 At3g51620 - C.G. S.X.
0.02 4e-9 65 Os03g0210800 BQ908513 - DNA polymerase, beta-like region domain containingprotein 6e+0 At5g60190 Ulp1 protease family protein C.G. S.X.
0.01 6e-2 42 Os02g0241100 9630.m01346 - Protein kinase domain containing protein 3e-1 At4g29460 phospholipase A2 gamma, secretory low molecular weight C.G. S.X.
0.01 2e-1 40 Os02g0244700 AF271995.1 - Phosphoenolpyruvate carboxylase 1 (EC 4.1.1.31)(PEPCase 1) (CP21) 5e-53 At3g14940 ATPPC3 (PHOSPHOENOLPYRUVATE CARBOXYLASE 3) C.G. S.X.
0.01 2e-1 40 Os04g0634000 AK106486.1 - S-locus glycoprotein family protein 1e-3 At1g24650 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.01 9e-1 38 Os03g0228200 9631.m01196 - Conserved hypothetical protein 2e-2 At2g23790 unknown protein C.G. S.X.
0.01 9e-1 38 Os04g0690400 AK102981.1 - Hypothetical protein 3e-2 At1g49010 myb family transcription factor C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 4e-23 111 Arabidopsis thaliana At3g51620 824325 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POFM - - - C.G. S.X.
0.04 7e-4 48 Glycine max GmaAffx.51147.1.S1_at BI700101 - - 5e-9 At3g51620 - C.G. S.X.
0.02 9e-7 56 Hordeum vulgare Contig6530_at Contig6530 - - 4e+0 At3g46090 ZAT7 C.G. S.X.
0.06 1e-5 54 Populus trichocarpa PtpAffx.212296.1.S1_at pmrna24108 hypothetical protein - 1e-20 At3g56320 nucleotidyltransferase family protein C.G. S.X.
0.08 3e-36 155 Triticum aestivum TaAffx.7327.1.S1_at CA662050 - - 7e-8 At3g51620 - C.G. S.X.
0.01 5e-1 36 Vitis vinifera 1617989_at CF511562 hypothetical protein LOC100258149 - 4e-1 At5g19340 unknown protein C.G. S.X.
0.07 2e-10 67 Zea mays Zm.6314.1.A1_at AI691362 - - 2e+0 At5g18150 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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