Gene omics information

Query gene ID	Os11g0107700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.81	94.8	Os11g0107700	AK073061.1	-	Protein kinase domain containing protein	3e-4	At3g56100	MRLK (MERISTEMATIC RECEPTOR-LIKE KINASE)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.84	96.0	Os01g0108800	AK102103.1	-	Plant protein of unknown function DUF936 familyprotein	1e+0	At4g23670	major latex protein-related / MLP-related	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.83	95.8	Os01g0605500	9629.m04029	-	Kinesin, motor region domain containing protein	5e-12	At1g18550	ATP binding / microtubule motor	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.80	94.6	Os03g0302900	AK069222.1	-	Hypothetical protein	2e+0	At5g59750	riboflavin biosynthesis protein, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.77	93.1	Os07g0659500	BX898151	-	Non-SMC condensin subunit, XCAP-D2/Cnd1 familyprotein	7e-25	At3g57060	binding	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.76	92.2	Os01g0685900	AK064024.1	-	65kD microtubule associated protein	1e-6	At5g51600	PLE (PLEIADE)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.75	91.9	Os05g0497100	AK064293.1	-	Chromosome condensation protein	7e-62	At5g48600	ATSMC3 (ARABIDOPSIS THALIANA STRUCTURAL MAINTENANCE OF CHROMOSOME 3)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os12g0560700	AK073411.1	-	PROLIFERA protein	2e-49	At4g02060	PRL (PROLIFERA)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.72	89.8	Os11g0580000	AK121905.1	-	ARM repeat fold domain containing protein	3e-1	At1g54580	ACP2 (ACYL CARRIER PROTEIN 2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.69	87.9	Os01g0166800	NM_184521.1	-	Conserved hypothetical protein	4e-9	At2g40550	ETG1 (E2F TARGET GENE 1)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.6	98.9	GSM409431	9311_young panicle 2cm, biological rep2	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
17.0	98.8	GSM409428	Nipponbare_young panicle 2cm, biological rep4	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
15.8	98.7	GSM409421	Nipponbare_young panicle 2cm, biological rep1	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
14.5	98.6	GSM409429	Nipponbare_young panicle 2cm, biological rep5	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
13.8	98.5	GSM409422	Nipponbare_young panicle 2cm, biological rep2	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
12.1	98.3	GSM409430	9311_young panicle 2cm, biological rep1	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.3	98.2	GSM409432	9311_young panicle 2cm, biological rep3	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
11.2	98.2	GSM409433	9311_young panicle 2cm, biological rep4	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.1	98.0	GSM409434	9311_young panicle 2cm, biological rep5	GSE16265	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.1	98.0	GSM377070	Genomic DNA - 45 day old leaf sample - mutant d1	GSE15071	Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.32	9e-68	260	Os03g0297800	AK107121.1	-	Protein kinase domain containing protein	8e-1	At4g05523	-	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.08	3e-9	65	Os01g0608000	D24997	-	Protein kinase domain containing protein	2e-1	At3g08680	leucine-rich repeat transmembrane protein kinase, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.05	4e-11	71	Os06g0198900	AK071363.1	-	Protein kinase domain containing protein	5e+0	At5g05160	leucine-rich repeat transmembrane protein kinase, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.04	4e-8	61	Os06g0717200	AK111824.1	-	Leucine-rich repeat/receptor protein kinaseprecursor	7e-12	At3g49670	BAM2 (BARELY ANY MERISTEM 2)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	3e-4	48	Arabidopsis thaliana	At3g56100	824776	MRLK (MERISTEMATIC RECEPTOR-LIKE KINASE)	Protein kinase expressed in meristematic cells. Phosphorylates AGL24.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	4e-1	38	Glycine max	GmaAffx.90658.1.S1_at	CF806383	-	-	2e-18	At4g14580	CIPK4 (CBL-interacting protein kinase 4)	C.G.	S.X.	Please select
0.05	6e-4	46	Hordeum vulgare	AF474072_CDS-1_at	AF474072_CDS-1	-	-	2e-1	At5g12310	zinc finger (C3HC4-type RING finger) family protein	C.G.	S.X.	Please select
0.04	2e-3	46	Populus trichocarpa	PtpAffx.154775.1.S1_s_at	CN524171	hypothetical protein	-	6e-19	At3g51740	IMK2 (INFLORESCENCE MERISTEM RECEPTOR-LIKE KINASE 2)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.40	1e-164	581	Triticum aestivum	Ta.6690.1.S1_a_at	CA499679	-	-	7e-1	At1g24145	unknown protein	C.G.	S.X.	Please select
0.02	1e+0	34	Vitis vinifera	1611981_at	CF403805	-	-	6e-2	At4g13720	inosine triphosphate pyrophosphatase, putative / HAM1 family protein	C.G.	S.X.	Please select
0.04	8e-3	42	Zea mays	Zm.14933.1.A1_a_at	CO521741	-	-	2e+0	At5g25940	early nodulin-related	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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