Gene omics information

Query gene ID Os11g0106400
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.6382.7Os11g0106400AK111781.1-Ubiquitin-activating enzyme family protein7e-31At2g30110ATUBA1S.X.H.G.
0.6079.7Os02g0803700AK103936.1-26S protease regulatory subunit 6A homolog(TAT-binding protein homolog 1) (TBP-1)7e-72At3g05530RPT5A (REGULATORY PARTICLE TRIPLE-A ATPASE 5A)S.X.H.G.
0.5777.0Os03g0243300AB010740.1-26S proteasome non-ATPase regulatory subunit 4(26S proteasome regulatory subunit S5A) (Multiubiquitinchain binding protein)1e-8At4g38630RPN10 (REGULATORY PARTICLE NON-ATPASE 10)S.X.H.G.
0.5573.7Os02g0205300AB033537.1-26S proteasome subunit 8 (Tat binding protein)5e-169At5g19990RPT6A (REGULATORY PARTICLE TRIPLE-A ATPASE 6A)S.X.H.G.
0.4051.1Os06g0192600AB033535.1-26S protease regulatory subunit 7 (26S proteasomesubunit 7) (26S proteasome AAA-ATPase subunit RPT1)(Regulatory particle triple-A ATPase subunit 1)9e-180At1g53750RPT1A (REGULATORY PARTICLE TRIPLE-A 1A)S.X.H.G.
0.3846.9Os07g0691800D17789.1-26S proteasome subunit 4-like protein (26Sproteasome subunit AtRPT2a)7e-100At2g2014026S protease regulatory complex subunit 4, putativeS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
4.296.0GSM35713314-day-old seedling, rep 2GSE14275Expression data for heat shock in rice seedlings
4.196.0GSM100441Rice Azucena 1ppm Arsenate Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
3.995.8GSM275413Azucena root tip_Buckled at the wax layer_rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.995.8GSM275415Azucena root tip_Before the wax layer_Rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.895.7GSM149410Rice Azucena 1ppm Arsenate Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
3.294.9GSM275416Azucena root tip_Before the wax layer_Rep3GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
3.194.8GSM100440Rice Azucena 0ppm Arsenate (Control) Rep2GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
3.094.6GSM275412Azucena root tip Buckled at the wax layer_rep2GSE10857Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.994.5GSM149409Rice Azucena 0ppm Arsenate (Control) Rep3GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
2.994.5GSM100439Rice Azucena 0ppm Arsenate (Control) Rep1GSE4471Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.304e-37159Os07g0692900AK074007.1-Ubiquitin-activating enzyme E1 34e-20At2g30110ATUBA1C.G.S.X.
0.244e-34149Os03g0294900AK120544.1-Ubiquitin-activating enzyme family protein2e-21At5g06460ATUBA2C.G.S.X.
0.074e-46188Os03g0613100AK059826.1-Ubiquitin-activating enzyme E1 22e+0At1g08810MYB60 (myb domain protein 60)C.G.S.X.
0.016e-242Os02g08199009630.m05720-Protein kinase domain containing protein6e-1At3g50870MNP (MONOPOLE)C.G.S.X.
0.016e-242Os06g0717200AK111824.1-Leucine-rich repeat/receptor protein kinaseprecursor7e-12At3g49670BAM2 (BARELY ANY MERISTEM 2)C.G.S.X.
0.012e-140Os05g02376009633.m01297--7e-1At1g22630unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.367e-31137Arabidopsis thalianaAt2g30110817562ATUBA1Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling.---C.G.S.X.
0.217e-47190Glycine maxGma.1973.1.S1_atBE347331--3e-77At2g30110ATUBA1C.G.S.X.
0.7202708Hordeum vulgareContig3328_atContig3328--6e-34At5g06460ATUBA2C.G.S.X.
0.301e-54216Populus trichocarpaPtpAffx.200913.1.S1_atpmrna1798hypothetical protein-2e-104At2g30110ATUBA1C.G.S.X.
0.7302872Triticum aestivumTa.95.1.S1_atM90663.1--4e-32At2g30110ATUBA1C.G.S.X.
0.136e-47188Vitis vinifera1606497_atCB346499hypothetical protein LOC100260899-1e-17At2g30110ATUBA1C.G.S.X.
0.5901806Zea maysZm.6234.1.S1_atAI670674hypothetical protein LOC100279472-4e-28At2g30110ATUBA1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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