CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0580900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0580900 AK072734.1 - Conserved hypothetical protein 5e-8 At4g25030 unknown protein S.X. H.G.
0.71 89.6 Os02g0126400 AF194413.1 - Protein kinase CPK1 6e-30 At2g17890 CPK16 S.X. H.G.
0.60 79.7 Os03g0285800 AF332873.1 - MAP kinase 1 (MAP kinase MAPK5a) 8e-4 At2g43790 ATMPK6 (ARABIDOPSIS THALIANA MAP KINASE 6) S.X. H.G.
0.53 71.3 Os02g0165100 AK066645.1 - Protein kinase domain containing protein 2e-4 At2g35620 FEI2 (FEI 2) S.X. H.G.
0.50 68.0 Os03g0241300 AK072703.1 - Hypothetical protein 1e+0 At3g49010 ATBBC1 (ARABIDOPSIS THALIANA BREAST BASIC CONSERVED 1) S.X. H.G.
0.44 58.1 Os01g0908700 AK120427.1 - Heterogeneous nuclear ribonucleoprotein A2 homolog1 (hnRNP A2(A)) 2e-17 At1g67800 copine-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
29.3 99.7 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
21.7 99.2 GSM375765 gid1-3_ shoot_replicate 1 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
17.6 98.9 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
15.8 98.7 GSM159182 Mature leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
15.2 98.7 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
11.0 98.2 GSM159181 Mature leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
9.3 97.9 GSM159189 Young inflorescence (P1, upto 3 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
9.2 97.9 GSM159209 Seed (S1, 0 - 2 dap), biological rep 3 GSE6893 Expression data for reproductive development in rice
9.0 97.8 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
8.3 97.7 GSM159180 Mature leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 1e-7 59 Os06g0115800 AK062240.1 - Conserved hypothetical protein 5e-2 At5g45410 unknown protein C.G. S.X.
0.13 4e-10 67 Os07g0159500 AK065419.1 - Conserved hypothetical protein 3e-3 At5g45410 unknown protein C.G. S.X.
0.01 2e-3 46 Os11g0296500 AK069633.1 - Zn-finger, CCHC type domain containing protein 2e+0 At5g43430 ETFBETA C.G. S.X.
0.01 2e-2 42 Os12g0574000 AK069006.1 - Amino acid/polyamine transporter II family protein 6e-2 At4g27880 seven in absentia (SINA) family protein C.G. S.X.
0.01 4e-1 38 Os05g0151000 9633.m00504 - RNA polymerase II largest subunit (Fragment) 4e-129 At4g35800 NRPB1 (RNA POLYMERASE II LARGE SUBUNIT) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 5e-8 59 Arabidopsis thaliana At4g25030 828606 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBF - - - C.G. S.X.
0.09 7e-8 59 Glycine max Gma.7029.1.S1_at CD404616 - - 9e-13 At4g25030 unknown protein C.G. S.X.
0.55 0 660 Hordeum vulgare Contig4491_s_at Contig4491 - - 7e-1 At5g45410 unknown protein C.G. S.X.
0.11 5e-9 63 Populus trichocarpa PtpAffx.48572.1.S1_a_at CV271103 - - 1e-14 At5g45410 unknown protein C.G. S.X.
0.46 0 644 Triticum aestivum Ta.1487.1.S1_at BE430377 - - 2e-1 At5g45410 unknown protein C.G. S.X.
0.07 4e-15 81 Vitis vinifera 1615923_at CA814782 hypothetical protein LOC100259846 - 8e-8 At4g25030 unknown protein C.G. S.X.
0.51 0 743 Zea mays Zm.9502.1.A1_at CK826941 hypothetical protein LOC100193661 - 5e-5 At5g45410 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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