CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0569300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os10g0569300 AK072459.1 - Putative methyltransferase DUF248 family protein 3e-10 At1g26850 dehydration-responsive family protein S.X. H.G.
0.55 73.7 Os01g0870100 AK067564.1 - DMI1 protein 1e-63 At5g49960 binding / catalytic S.X. H.G.
0.50 68.0 Os03g0655600 AK120778.1 - FAR1 domain containing protein 5e-1 At1g47970 unknown protein S.X. H.G.
0.44 58.1 Os06g0693700 AK072507.1 - - 2e-1 At5g02570 histone H2B, putative S.X. H.G.
0.36 44.0 Os11g0515500 AK105629.1 - Conserved hypothetical protein 1e-1 At3g26810 AFB2 (AUXIN SIGNALING F-BOX 2) S.X. H.G.
0.25 24.1 Os04g0643600 AK105170.1 - Cyclic nucleotide-gated channel C (Fragment) 9e-9 At5g57940 ATCNGC5 (CYCLIC NUCLEOTIDE GATED CHANNEL 5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
12.6 98.4 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.6 98.1 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.5 98.1 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
10.0 98.0 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
9.4 97.9 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.9 97.8 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.6 97.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.6 97.8 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.3 97.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.11 3e-8 61 Os03g0379100 AK119277.1 - Putative methyltransferase DUF248 family protein 2e-15 At1g26850 dehydration-responsive family protein C.G. S.X.
0.08 2e-3 46 Os10g0510400 AK100601.1 - Putative methyltransferase DUF248 family protein 1e-3 At1g33170 dehydration-responsive family protein C.G. S.X.
0.02 2e-6 56 Os06g0103900 AK111870.1 - Putative methyltransferase DUF248 family protein 3e-10 At4g10440 dehydration-responsive family protein C.G. S.X.
0.01 8e-3 44 Os05g0518200 AK107178.1 - Conserved hypothetical protein 3e-2 At5g55130 CNX5 (CO-FACTOR FOR NITRATE, REDUCTASE AND XANTHINE DEHYDROGENASE 5) C.G. S.X.
0.01 8e-3 44 Os07g0170300 AK072392.1 - YT521-B-like protein family protein 2e-18 At3g13460 ECT2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 3e-10 67 Arabidopsis thaliana At1g26850 839229 dehydration-responsive family protein F:unknown;P:unknown;C:Golgi apparatus, membrane;PBO - - - C.G. S.X.
0.17 2e-15 85 Glycine max Gma.7233.1.S1_at BQ453257 - - 2e-39 At4g18030 dehydration-responsive family protein C.G. S.X.
0.44 2e-145 515 Hordeum vulgare Contig10400_s_at Contig10400 - - 4e-5 At1g26850 dehydration-responsive family protein C.G. S.X.
0.28 1e-22 109 Populus trichocarpa PtpAffx.210508.1.S1_s_at pmrna20612 hypothetical protein - 1e-28 At1g26850 dehydration-responsive family protein C.G. S.X.
0.14 2e-45 184 Triticum aestivum Ta.30375.1.A1_at CK199586 - - 4e-7 At2g43200 dehydration-responsive family protein C.G. S.X.
0.14 2e-24 113 Vitis vinifera 1612756_at CF207475 hypothetical protein LOC100258541 - 1e-45 At1g26850 dehydration-responsive family protein C.G. S.X.
0.01 5e-1 36 Zea mays Zm.8716.1.A1_at BM075322 - - 6e+0 At5g49525 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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