Gene omics information

Query gene ID Os10g0554100
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.4458.1Os10g0554100AK071048.1-Oxysterol-binding protein family protein8e-36At2g31030ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B)S.X.H.G.
0.5068.0Os03g0278300AK071965.1-Transcriptional coactivator-like protein6e-12At5g02530RNA and export factor-binding protein, putativeS.X.H.G.
0.4458.1Os01g0622600CB642720-Calcium-dependent protein kinase2e-23At4g23650CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)S.X.H.G.
0.4458.1Os03g0274000AK060769.1-Oxysterol-binding protein family protein1e-24At5g02100UNE18 (UNFERTILIZED EMBRYO SAC 18)S.X.H.G.
0.4458.1Os01g0510100CB656690-MAP kinase kinase 15e-30At5g56580MKK6 (MAP KINASE KINASE 6)S.X.H.G.
0.3338.8Os08g0157900AK065294.1-No apical meristem (NAM) protein domain containingprotein6e-6At5g18270ANAC087S.X.H.G.
0.2219.4Os03g0280000AK120269.1-ABC transporter, transmembrane region domaincontaining protein2e-72At3g55320PGP20 (P-GLYCOPROTEIN 20)S.X.H.G.
0.116.5Os05g0511400AK101120.1-Protein kinase GhCLK1 (Fragment)3e-41At4g14350protein kinase family proteinS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.497.9GSM302918leaf_rep1GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
8.597.7GSM159184Y Leaf, biological rep 2GSE6893Expression data for reproductive development in rice
7.897.6GSM375767gid1-3_ shoot_replicate 3GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
6.297.1GSM375766gid1-3_ shoot_replicate 2GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
6.197.1GSM302919leaf_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
6.097.0GSM159189Young inflorescence (P1, upto 3 cm), biological rep 1GSE6893Expression data for reproductive development in rice
5.796.9GSM375765gid1-3_ shoot_replicate 1GSE15046Transcriptome analysis of gibberellin-signaling mutants in rice
5.296.7GSM173091Rice OsSRT1 RNAi transgenic line LM1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
5.196.6GSM302921root_rep2GSE11966Expression data from rice embryo,endosperm,root,leaf and seedling
4.896.5GSM173086Rice MH63 Control1GSE7197Down-regulation of OsSRT1 induces DNA ´╗┐fragmentation and cell death in rice
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.132e-1379Os03g0704700CA764876-Pleckstrin-like domain containing protein5e-64At2g31030ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B)C.G.S.X.
0.091e-863Os12g0285600AK069104.1-Oxysterol-binding protein family protein3e-26At1g13170ORP1D (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1D)C.G.S.X.
0.027e-1067Os08g0530000AK065712.1-Uridine-cytidine kinase 2 (EC 2.7.1.48) (UCK 2)(Uridine monophosphokinase 2) (Cytidine monophosphokinase2)5e-52At3g27190uracil phosphoribosyltransferase, putative / UMP pyrophosphorylase, putative / UPRTase, putativeC.G.S.X.
0.023e-346Os06g0574500AK071838.1-Protein phosphatase 2A5e-33At1g10430PP2A-2C.G.S.X.
0.014e-552Os05g0170000AK100216.1-Arabidopsis protein of unknown function DUF266family protein7e-8At5g14550unknown proteinC.G.S.X.
0.011e-244Os01g0346700AK071793.1-Conserved hypothetical protein5e-4At1g75550glycine-rich proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.178e-36153Arabidopsis thalianaAt2g31030817654ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B)F:oxysterol binding;P:steroid metabolic process;C:cellular_component unknown;MFOP---C.G.S.X.
0.073e-861Glycine maxGmaAffx.78583.1.S1_atBM891075--4e-57At2g31030ORP1B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1B)C.G.S.X.
0.244e-113408Hordeum vulgareContig14887_atContig14887--2e-2At4g08180ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C)C.G.S.X.
0.214e-23111Populus trichocarpaPtpAffx.225202.1.S1_x_atpmrna44365hypothetical protein-1e-99At4g22540ORP2A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A)C.G.S.X.
0.281e-102375Triticum aestivumTaAffx.11684.1.S1_atCA673847--7e-6At4g08180ORP1C (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 1C)C.G.S.X.
0.073e-1479Vitis vinifera1612383_atCF608082hypothetical protein LOC100253994-2e-5At4g12460ORP2B (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2B)C.G.S.X.
0.034e-240Zea maysZm.16409.1.A1_atCF623827--2e-2At4g22540ORP2A (OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 2A)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0008202The chemical reactions and pathways involving steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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