Gene omics information

Query gene ID	Os10g0551700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.91	98.9	Os10g0551700	AK107851.1	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	7e-3	At2g35960	NHL12	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.73	91.1	Os02g0816200	AK060243.1	-	Lipolytic enzyme, G-D-S-L family protein	2e-4	At3g04290	LTL1 (LI-TOLERANT LIPASE 1)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os10g0150300	BI805240	-	Protein of unknown function DUF1210 family protein	2e+0	At5g17840	chaperone protein dnaJ-related	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os07g0565800	AK062834.1	-	Conserved hypothetical protein	2e+0	At3g25577	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.40	51.1	Os01g0814100	AK061173.1	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	5e-1	At2g14170	ALDH6B2	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.38	46.9	Os01g0952000	AK099691.1	-	Rhicadhesin receptor precursor (Germin-likeprotein)	2e-3	At3g62020	GLP10 (GERMIN-LIKE PROTEIN 10)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
17.5	98.9	GSM99878	TCHW P20_ir29 control, biological rep2	GSE4438	Expression data from rice under salinity stress
16.1	98.7	GSM99867	TCHW P10_ir29 salt stress, biological rep1	GSE4438	Expression data from rice under salinity stress
14.9	98.6	GSM99858	TCHW P1_m103 control, biological rep1	GSE4438	Expression data from rice under salinity stress
11.3	98.2	GSM99870	TCHW P13_agami control, biological rep1	GSE4438	Expression data from rice under salinity stress
10.8	98.1	GSM99880	TCHW P22_ir29 salt stress, biological rep1	GSE4438	Expression data from rice under salinity stress
10.8	98.1	GSM99879	TCHW P21_ir29 control, biological rep3	GSE4438	Expression data from rice under salinity stress
10.6	98.1	GSM99864	TCHW P7_ir29 control, biological rep1	GSE4438	Expression data from rice under salinity stress
10.5	98.1	GSM99877	TCHW P19_ir29 control, biological rep1	GSE4438	Expression data from rice under salinity stress
9.6	97.9	GSM281587	Rice mutant dst, biological rep2	GSE11175	Comparison of transcriptome profile between wild-type and dst mutant plants
9.6	97.9	GSM99860	TCHW P3_m103 control, biological rep3	GSE4438	Expression data from rice under salinity stress

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.13	3e-6	54	Os02g0662100	AK058218.1	-	ZmGR1a protein	4e-1	At4g12510	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.12	9e-10	65	Os10g0551800	L27209.1	-	Root-specific protein (RCc2 protein)	2e+0	At5g17870	PSRP6 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 6)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.09	3e-6	54	Os04g0554800	9632.m04516	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	1e-1	At4g12550	AIR1	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.08	3e-6	54	Os03g0103200	AK062654.1	-	Physical impedance induced protein	1e+0	At1g12080	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.07	1e-5	52	Os10g0349900	AK062848.1	-	Plant lipid transfer/seed storage/trypsin-alphaamylase inhibitor domain containing protein	5e-3	At1g12090	ELP (EXTENSIN-LIKE PROTEIN)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.03	1e-5	52	Os08g0200600	AK105596.1	-	No apical meristem (NAM) protein domain containingprotein	9e-1	At1g06410	ATTPS7	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.02	5e-5	50	Os06g0140700	AY206864.1	-	Homeobox-leucine zipper protein HAT14 (HD-ZIPprotein 14)	5e-2	At4g17460	HAT1	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.01	5e-5	50	Os11g0186300	AK109545.1	-	Putative methyltransferase DUF248 family protein	2e-9	At2g34300	dehydration-responsive protein-related	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.03	7e-3	42	Arabidopsis thaliana	At2g35960	818169	NHL12	Encodes a protein whose sequence is similar to tobacco hairpin-induced gene (HIN1) and Arabidopsis non-race specific disease resistance gene (NDR1). Expression is not altered in response to cucumber mosaic virus or spermine.	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.04	6e-4	46	Glycine max	GmaAffx.66307.1.S1_at	BM309319	-	-	9e-4	At2g02880	mucin-related	C.G.	S.X.	Please select
0.08	1e-11	69	Hordeum vulgare	Contig3773_at	Contig3773	-	-	5e+0	Atmg00870	-	C.G.	S.X.	Please select
0.04	2e+0	34	Populus trichocarpa	PtpAffx.224082.1.S1_x_at	pmrna42319	hypothetical protein	-	1e-2	At5g61030	GR-RBP3 (glycine-rich RNA-binding protein 3)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.14	1e-10	67	Triticum aestivum	Ta.28139.1.S1_at	CK216349	-	-	4e-1	At4g12545	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select
0.03	1e-1	36	Vitis vinifera	1619140_at	CF606031	hypothetical protein LOC100246049	-	4e-4	At2g35270	DNA-binding protein-related	C.G.	S.X.	Please select
0.10	1e-5	50	Zea mays	Zm.3427.1.A1_at	AY108411.1	cortical cell-delineating protein	-	9e-2	At4g12545	protease inhibitor/seed storage/lipid transfer protein (LTP) family protein	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name
C	GO:0006869	The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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