Gene omics information

Query gene ID Os10g0542900
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.5269.6Os10g0542900BM038035-Chitinase (EC 3.2.1.14) (Fragment)3e-5At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)S.X.H.G.
0.6181.2Os03g0663500U77656.1-Thaumatin, pathogenesis-related family protein7e+0At3g25400-S.X.H.G.
0.4051.1Os11g0592000AK121059.1-Barwin7e-3At3g04720PR4 (PATHOGENESIS-RELATED 4)S.X.H.G.
0.3541.7Os09g0472900BI797815-Expansin-related protein 2 precursor (AtEXPR2)(Ath-ExpGamma-1.1)8e+0At3g03920Gar1 RNA-binding region family proteinS.X.H.G.
0.2727.5Os01g0592500AK111253.1-Protein of unknown function DUF1070 family protein1e+0At2g11005glycine-rich proteinS.X.H.G.
0.1915.1Os06g0569500CB618023-Ent-kaurene oxidase (EC 1.14.13.78) (AtKO1)(Cytochrome P450 701A3)3e+0At1g78172unknown proteinS.X.H.G.
0.021.0Os12g0635400AK063156.1-Hypothetical protein2e+0At5g52150zinc finger (C3HC4-type RING finger) family proteinS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.199.9GSM159209Seed (S1, 0 - 2 dap), biological rep 3GSE6893Expression data for reproductive development in rice
48.099.9GSM159207Seed (S1, 0 - 2 dap), biological rep 1GSE6893Expression data for reproductive development in rice
29.399.7GSM159208Seed (S1, 0 - 2 dap), biological rep 2GSE6893Expression data for reproductive development in rice
27.199.6GSM159210Seed (S2, 3 - 4 dap), biological rep 1GSE6893Expression data for reproductive development in rice
22.699.3GSM159182Mature leaf, biological rep 3GSE6893Expression data for reproductive development in rice
22.599.3GSM159180Mature leaf, biological rep 1GSE6893Expression data for reproductive development in rice
20.699.1GSM159181Mature leaf, biological rep 2GSE6893Expression data for reproductive development in rice
14.498.6GSM159212Seed (S2, 3 - 4 dap), biological rep 3GSE6893Expression data for reproductive development in rice
12.298.3GSM159211Seed (S2, 3 - 4 dap), biological rep 2GSE6893Expression data for reproductive development in rice
10.198.0GSM159184Y Leaf, biological rep 2GSE6893Expression data for reproductive development in rice
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.222e-1481Os05g0399400L37289.1-Chitinase (EC 3.2.1.14)4e-2At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.218e-1479Os06g0726100Z29962.1-Endochitinase precursor (EC 3.2.1.14)1e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.161e-656Os03g0132900AK099355.1-Chitinase (EC 3.2.1.14) (Fragment)6e-10At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.126e-550Os06g0726200AK061042.1-Endochitinase precursor (EC 3.2.1.14)2e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.092e-448Os01g0287600AK063062.1-Chitinase (Class II) (EC 3.2.1.14)3e-2At3g54420ATEP3C.G.S.X.
0.041e-656Os05g0399700AB012855.1-Chitinase (EC 3.2.1.14)3e+0At5g25940early nodulin-relatedC.G.S.X.
0.032e-1481Os01g0511600AK072161.1-Hypothetical protein9e-8At1g32080membrane protein, putativeC.G.S.X.
0.023e-1377Os01g0871800AK064787.1-Conserved hypothetical protein5e-1At4g13530unknown proteinC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.033e-550Arabidopsis thalianaAt3g12500820429ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses.---C.G.S.X.
0.042e-448Glycine maxGma.2833.1.S1_s_atAF202731.1chitinase class I-9e-3At4g01700chitinase, putativeC.G.S.X.
0.511e-52206Hordeum vulgareContig2992_s_atContig2992--4e-5At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.053e+034Populus trichocarpaPtpAffx.77318.2.S1_atCX658035hypothetical protein-5e-4At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.503e-45182Triticum aestivumTa.30501.1.S1_atCK205943--2e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
0.032e+032Vitis vinifera1609826_atCB342087--1e+0At5g45940atnudt11 (Arabidopsis thaliana Nudix hydrolase homolog 11)C.G.S.X.
0.183e-961Zea maysZm.201.1.S1_atL16798.1class I acidic chitinase-8e-3At3g12500ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE)C.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0051707A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from another living organism.
CGO:0006032The chemical reactions and pathways resulting in the breakdown of chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues.
CGO:0016998The chemical reactions and pathways resulting in the breakdown of macromolecules that form part of a cell wall.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage