CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0530900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0530900 AF309376.1 - Glutathione S-transferase GST 30 (EC 2.5.1.18) 2e+0 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
0.67 87.2 Os03g0154000 AK103088.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g13882 structural constituent of ribosome S.X. H.G.
0.61 81.2 Os10g0528300 AF309378.1 - Tau class GST protein 4 2e-4 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) S.X. H.G.
0.60 79.7 Os09g0518200 AK064395.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) S.X. H.G.
0.60 79.7 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) S.X. H.G.
0.42 53.9 Os02g0755900 AK104985.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 8e-1 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.0 99.9 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
44.2 99.9 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
39.3 99.9 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
39.1 99.9 GSM100442 Rice Azucena 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
32.5 99.8 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
28.1 99.6 GSM100441 Rice Azucena 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
14.9 98.6 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
14.1 98.5 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
10.8 98.1 GSM302920 root_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
8.8 97.8 GSM116399 Seedling_IAA treated_rep1 GSE5167 Rice seedling hormone treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.85 0 906 Os10g0527400 D10861.1 - Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1) 5e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.65 0 1564 Os10g0530800 AK111429.1 - - 7e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.58 7e-153 541 Os10g0531400 AF402797.1 - - 2e+0 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.37 7e-153 541 Os10g0531300 AK108900.1 - Conserved hypothetical protein 2e+0 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.34 1e-30 135 Os10g0530700 9638.m03485 - Glutathione S-transferase GST 38 (EC 2.5.1.18) 1e+0 At1g17190 ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26) C.G. S.X.
0.17 4e-25 117 Os01g0692000 AK064650.1 - Glutathione S-transferase GST 26 (EC 2.5.1.18) 2e-3 At3g09270 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8) C.G. S.X.
0.17 5e-24 113 Os10g0528100 CR288637 - - 1e+1 At4g17245 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 2e+0 34 Arabidopsis thaliana At1g18680 838449 HNH endonuclease domain-containing protein F:endonuclease activity, nucleic acid binding;P:N-terminal protein myristoylation;C:chloroplast;POB - - - C.G. S.X.
0.02 2e-1 38 Glycine max PsAffx.CL82Contig1_at PsAffx.CL82Contig1 - - 4e-32 At2g47170 ARF1A1C C.G. S.X.
0.40 3e-109 395 Hordeum vulgare Contig12776_at Contig12776 - - 1e+0 At2g35900 unknown protein C.G. S.X.
0.03 3e+0 34 Populus trichocarpa PtpAffx.221446.1.S1_at pmrna38341 - - 2e+0 At3g55910 unknown protein C.G. S.X.
0.51 8e-108 391 Triticum aestivum Ta.3679.1.S1_x_at CA733231 glutathione transferase - 6e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.02 2e+0 32 Vitis vinifera 1620990_at CF511811 hypothetical protein LOC100247103 - 1e-18 At1g19330 unknown protein C.G. S.X.
0.49 1e-70 266 Zea mays Zm.864.1.S1_at AF244695.1 glutathione transferase30 - 2e+0 At1g78340 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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