Gene omics information

Query gene ID	Os10g0529700
Gene name
Organism	Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF	%ile	Gene/Probe ID	Repr.ID	Gene Name	Functional Description	Ev	AGI code	Arabidopsis gene name	S.X.	H.G.	Other DB
0.86	96.4	Os10g0529700	AF402795.1	-	-	6e-1	At5g19880	peroxidase, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.64	83.4	Os03g0594900	AK069017.1	-	Cytochrome P450 family protein	4e+0	At5g46030	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.64	83.4	Os04g0578200	AK073300.1	-	Conserved hypothetical protein	6e-1	At3g12977	DNA binding	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.59	78.0	Os02g0704300	AK058932.1	-	Hypothetical protein	3e-6	At5g35970	DNA-binding protein, putative	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.57	77.0	Os01g0700100	AK059965.1	-	MtN3 and saliva related transmembrane proteinfamily protein	4e-2	At3g53420	PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os03g0228200	9631.m01196	-	Conserved hypothetical protein	2e-2	At2g23790	unknown protein	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os01g0175700	CB624018	-	HCO3-transporter domain containing protein	2e-5	At1g15460	BOR4 (REQUIRES HIGH BORON 4)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	73.7	Os02g0207400	9630.m01045	-	-	2e-1	At4g34135	UGT73B2 (UDP-GLUCOSYLTRANSFERASE 73B2)	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.54	71.9	Os01g0804400	AK070931.1	-	Cytochrome P450 family protein	2e-1	At1g34540	CYP94D1	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.53	71.3	Os08g0139700	CB617889	-	Terpene synthase-like domain containing protein	2e+0	At1g72416	heat shock protein binding	S.X.	H.G.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.

Std2 GX	%ile	GSM ID	Assay Name	GSE ID	Experiment Title
27.4	99.6	GSM421686	XOC, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
24.6	99.4	GSM421683	XOC, 96 hai - rep1	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
21.2	99.2	GSM421685	XOC, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
19.1	99.0	GSM421684	XOC, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
17.8	98.9	GSM421726	MOCK, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
15.9	98.7	GSM421706	XOO, 96 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
13.6	98.5	GSM421724	MOCK, 96 hai - rep2	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.7	98.4	GSM421682	XOC, 24 hai - rep4	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
12.1	98.3	GSM421705	XOO, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
11.2	98.2	GSM421725	MOCK, 96 hai - rep3	GSE16793	Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola

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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF	Ev	BS	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.64	0	1065	Os10g0529500	CR279062	-	Glutathione S-transferase, N-terminal domaincontaining protein	2e+0	At5g56320	ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.55	4e-179	628	Os10g0529400	AF402796.1	-	Tau class GST protein 4	2e-3	At4g33560	unknown protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.47	0	1449	Os10g0529600	AK107092.1	-	Conserved hypothetical protein	1e+0	At5g19880	peroxidase, putative	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.30	1e-59	232	Os10g0528400	AF309379.1	-	Glutathione S-transferase, C-terminal domaincontaining protein	1e-1	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)
0.27	6e-55	216	Os10g0530300	9638.m03481	-	Glutathione S-transferase GST 22 (EC 2.5.1.18)(Fragment)	5e-3	At1g02710	glycine-rich protein	C.G.	S.X.	Please selectKEGG (integral)Gramene (integral)KaPPA-View 4 (pathway)

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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF	Ev	BS	Species	Gene ID	Repr. ID	Gene Name	Functional description	Ev	AGI code	Arabidopsis gene name	C.G.	S.X.	Other DB
0.02	6e-1	36	Arabidopsis thaliana	At5g19880	832110	peroxidase, putative	F:electron carrier activity, peroxidase activity, heme binding;P:response to ethylene stimulus, response to oxidative stress, response to virus, N-terminal protein myristoylation;C:endomembrane system;PFOM	-	-	-	C.G.	S.X.	Please selectath TAIR (integral)ath,osa KEGG (integral)ath PlantTribes (integral)ath,osa Gramene (integral)ath MPSS (genome)ath InParanoid (ortholog)ath Plant RBP (ortholog)ath SIGnAL (T-DNA)ath RAFL (full-length clone)ath AtGDB (genome)ath Genevestigator (expression)ath,ptr eFP Browser (expression)ath AVT (expression)ath ATTED-II (co-expression)ath AtcisDB (cis-element)ath SUBA (hydropathy)ath AtProteomeath Plant Proteome Databaseath PMN (pathway)ath,osa KaPPA-View 4 (pathway)ath RnR (over-expression)ath iHOP (report)
0.02	5e-2	40	Glycine max	PsAffx.CL697Contig1_at	PsAffx.CL697Contig1	-	-	7e+0	At5g56020	-	C.G.	S.X.	Please select
0.42	3e-38	159	Hordeum vulgare	Contig7448_at	Contig7448	-	-	1e-1	At1g78340	ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22)	C.G.	S.X.	Please select
0.04	3e+0	34	Populus trichocarpa	Ptp.5289.1.S1_s_at	BI068908	hypothetical protein	-	1e-7	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	C.G.	S.X.	Please selectath,ptr eFP Browser (expression)
0.27	2e-40	167	Triticum aestivum	Ta.1830.2.S1_x_at	CA683961	-	-	4e-3	At3g43800	ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27)	C.G.	S.X.	Please select
0.04	3e-6	52	Vitis vinifera	1617423_at	CB969252	hypothetical protein LOC100245065	-	5e-8	At1g10360	ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18)	C.G.	S.X.	Please select
0.33	1e-55	216	Zea mays	Zm.13591.1.S1_at	AY107788.1	glutathione transferase42	-	2e+0	At1g10370	ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9)	C.G.	S.X.	Please select

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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC	GO ID	Process Name

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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID	Link to Kappa-View	Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID	Link to KEGG PATHWAY	Pathway Name

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