CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0528300

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0528300 AF309378.1 - Tau class GST protein 4 2e-4 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) S.X. H.G.
0.83 95.8 Os09g0518200 AK064395.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At1g22340 AtUGT85A7 (UDP-glucosyl transferase 85A7) S.X. H.G.
0.83 95.8 Os09g0367700 AF309377.1 - GST6 protein (EC 2.5.1.18) 5e-4 At1g27130 ATGSTU13 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 13) S.X. H.G.
0.67 87.2 Os10g0530900 AF309376.1 - Glutathione S-transferase GST 30 (EC 2.5.1.18) 2e+0 At1g18680 HNH endonuclease domain-containing protein S.X. H.G.
0.57 77.0 Os01g0638000 AK103824.1 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-2 At1g22380 AtUGT85A3 (UDP-glucosyl transferase 85A3) S.X. H.G.
0.50 68.0 Os03g0154000 AK103088.1 - Aromatic-ring hydroxylase family protein 3e+0 At3g13882 structural constituent of ribosome S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
47.2 99.9 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
45.7 99.9 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
44.7 99.9 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
44.3 99.9 GSM100441 Rice Azucena 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
43.7 99.9 GSM100442 Rice Azucena 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
31.6 99.7 GSM149412 Rice Bala 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
14.1 98.5 GSM116400 Seedling_IAA treated_rep2 GSE5167 Rice seedling hormone treatment
12.4 98.3 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.9 98.1 GSM116399 Seedling_IAA treated_rep1 GSE5167 Rice seedling hormone treatment
9.2 97.9 GSM275413 Azucena root tip_Buckled at the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 6e-64 246 Os10g0529500 CR279062 - Glutathione S-transferase, N-terminal domaincontaining protein 2e+0 At5g56320 ATEXPA14 (ARABIDOPSIS THALIANA EXPANSIN A14) C.G. S.X.
0.32 6e-55 216 Os10g0527800 AF402799.1 - Tau class GST protein 3 5e-1 At1g51930 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.30 4e-53 210 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.26 2e-57 224 Os10g0530700 9638.m03485 - Glutathione S-transferase GST 38 (EC 2.5.1.18) 1e+0 At1g17190 ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26) C.G. S.X.
0.25 1e-62 242 Os10g0530300 9638.m03481 - Glutathione S-transferase GST 22 (EC 2.5.1.18)(Fragment) 5e-3 At1g02710 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-4 48 Arabidopsis thaliana At3g43800 823491 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). - - - C.G. S.X.
0.04 3e-3 44 Glycine max GmaAffx.93206.1.S1_x_at CF808931 glutathione S-transferase /// 2,4-D inducible glutathione S-transferase /// glutathione transferase - 2e-8 At1g17180 ATGSTU25 (GLUTATHIONE S-TRANSFERASE TAU 25) C.G. S.X.
0.33 1e-40 167 Hordeum vulgare Contig13901_at Contig13901 - - 4e-1 At1g10140 - C.G. S.X.
0.04 3e+0 34 Populus trichocarpa PtpAffx.225564.1.S1_at pmrna44998 hypothetical protein - 9e-3 At2g29440 ATGSTU6 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 6) C.G. S.X.
0.29 4e-39 163 Triticum aestivum Ta.1830.2.S1_x_at CA683961 - - 4e-3 At3g43800 ATGSTU27 (GLUTATHIONE S-TRANSFERASE TAU 27) C.G. S.X.
0.06 3e-3 42 Vitis vinifera 1617423_at CB969252 hypothetical protein LOC100245065 - 5e-8 At1g10360 ATGSTU18 (GLUTATHIONE S-TRANSFERASE TAU 18) C.G. S.X.
0.35 1e-46 186 Zea mays Zm.13591.1.S1_at AY107788.1 glutathione transferase42 - 2e+0 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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