CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0527800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0527800 AF402799.1 - Tau class GST protein 3 5e-1 At1g51930 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
0.91 98.9 Os08g0189600 AF032976.1 - Germin-like protein 6 5e-1 At5g38930 germin-like protein, putative S.X. H.G.
0.60 79.7 Os08g0189900 AF141879.1 - Oxalate oxidase-like protein or germin-likeprotein (Germin-like 8) (Germin-like 12) 1e-1 At5g38950 germin-like protein-related S.X. H.G.
0.50 68.0 Os11g0255500 AK110615.1 - Allyl alcohol dehydrogenase 7e-10 At5g16970 AT-AER (alkenal reductase) S.X. H.G.
0.40 51.1 Os08g0190100 AF141878.1 - Oxalate oxidase-like protein or germin-likeprotein (Germin-like 8) (Germin-like 12) 5e-1 At1g02335 GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.) S.X. H.G.
0.23 21.2 Os04g0634500 AK071656.1 - KI domain interacting kinase 1 1e-5 At4g03230 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar binding S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.0 99.9 GSM100446 Rice Bala 1ppm Arsenate Rep2 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
38.3 99.8 GSM149410 Rice Azucena 1ppm Arsenate Rep3 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
26.2 99.5 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
25.5 99.5 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
22.7 99.3 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
22.2 99.3 GSM100445 Rice Bala 1ppm Arsenate Rep1 GSE4471 Expression data from rice varieties Azucena and Bala grown in 0 and 1ppm arsenate
15.6 98.7 GSM154943 Root_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
14.8 98.6 GSM431928 Root- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
13.9 98.5 GSM431927 Root- -Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
13.7 98.5 GSM154939 Root_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.58 0 862 Os10g0528100 CR288637 - - 1e+1 At4g17245 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.43 7e-85 315 Os10g0527400 D10861.1 - Glutathione S-transferase TSI-1 (EC 2.5.1.18)(Glutathione S- transferase 1) 5e-1 At2g29450 ATGSTU5 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 5) C.G. S.X.
0.34 1e-83 311 Os10g0529300 AF402794.1 - Tau class GST protein 3 3e-5 At4g36780 transcription regulator C.G. S.X.
0.32 1e-92 341 Os10g0528400 AF309379.1 - Glutathione S-transferase, C-terminal domaincontaining protein 1e-1 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.30 2e-69 264 Os10g0530300 9638.m03481 - Glutathione S-transferase GST 22 (EC 2.5.1.18)(Fragment) 5e-3 At1g02710 glycine-rich protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 5e-1 36 Arabidopsis thaliana At1g51930 841621 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:endomembrane system;PMOFV - - - C.G. S.X.
0.04 4e-2 40 Glycine max Gma.1917.1.S1_at AF243365.1 glutathione S-transferase - 9e-15 At1g78380 ATGSTU19 (GLUTATHIONE S-TRANSFERASE TAU 19) C.G. S.X.
0.40 1e-49 196 Hordeum vulgare Contig14304_at Contig14304 - - 6e+0 At1g78340 ATGSTU22 (GLUTATHIONE S-TRANSFERASE TAU 22) C.G. S.X.
0.03 7e-1 36 Populus trichocarpa Ptp.4759.1.S1_at CF235935 hypothetical protein - 2e-2 At5g14310 AtCXE16 (Arabidopsis thaliana carboxyesterase 16) C.G. S.X.
0.38 5e-44 178 Triticum aestivum Ta.14483.1.S1_x_at CA652948 - - 3e-2 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1609869_at CA815742 hypothetical protein LOC100253108 - 5e-6 At1g51560 FMN binding C.G. S.X.
0.35 5e-39 161 Zea mays Zm.557.1.A1_at AF244697.1 glutathione S-transferase GST 32 - 3e-2 At1g10370 ERD9 (EARLY-RESPONSIVE TO DEHYDRATION 9) C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage