CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0501500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.83 95.8 Os10g0501500 AK058495.1 - Protein of unknown function DUF607 family protein 1e-8 At2g23790 unknown protein S.X. H.G.
0.07 3.7 Os03g0248000 AK070612.1 - Autophagy protein Apg9 family protein 3e-5 At2g31260 APG9 (autophagy 9) S.X. H.G.
0.04 2.0 Os02g0655600 AK101560.1 - Protein of unknown function DUF676 domaincontaining protein 6e-5 At5g51180 unknown protein S.X. H.G.
0.03 1.4 Os08g0104700 AK120989.1 - Phosphatidylinositol-4-phosphate 5-kinase familyprotein 7e-4 At4g33240 1-phosphatidylinositol-4-phosphate 5-kinase/ ATP binding / phosphatidylinositol phosphate kinase/ protein binding / zinc ion binding S.X. H.G.
0.02 1.0 Os02g0166600 AK069371.1 - Conserved hypothetical protein 5e-2 At5g39540 - S.X. H.G.
0.01 0.5 Os04g0648800 AK067751.1 - Conserved hypothetical protein 1e-6 At2g15530 zinc finger (C3HC4-type RING finger) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
11.0 98.2 GSM159271 Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
8.0 97.6 GSM159208 Seed (S1, 0 - 2 dap), biological rep 2 GSE6893 Expression data for reproductive development in rice
7.5 97.5 GSM431929 Root- +Fe-P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.1 97.4 GSM431926 Root- +Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.8 97.3 GSM159207 Seed (S1, 0 - 2 dap), biological rep 1 GSE6893 Expression data for reproductive development in rice
6.8 97.3 GSM431927 Root- -Fe+P biological rep1 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
6.3 97.2 GSM302922 seedling_rep1 GSE11966 Expression data from rice embryo,endosperm,root,leaf and seedling
6.2 97.1 GSM159184 Y Leaf, biological rep 2 GSE6893 Expression data for reproductive development in rice
5.9 97.0 GSM173080 Rice MH63 Control2 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
5.7 96.9 GSM173091 Rice OsSRT1 RNAi transgenic line LM1 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 7e-129 462 Os06g0192300 9634.m00877 - - 3e-1 At1g64340 unknown protein C.G. S.X.
0.15 4e-16 87 Os03g0233000 AK069495.1 - Protein of unknown function DUF607 family protein 1e-2 At5g66650 unknown protein C.G. S.X.
0.04 2e-9 65 Os01g0817000 AK072492.1 - Protein of unknown function DUF607 family protein 1e-2 At5g66815 unknown protein C.G. S.X.
0.03 2e-9 65 Os01g0514700 AK069218.1 - Protein kinase domain containing protein 3e-4 At2g01210 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.03 2e-6 56 Os11g0107500 AK121033.1 - - 8e-4 At5g01650 macrophage migration inhibitory factor family protein / MIF family protein C.G. S.X.
0.03 1e-4 50 Os01g0903766 9629.m06730 - - 2e-2 At1g02710 glycine-rich protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 1e-8 61 Arabidopsis thaliana At2g23790 816911 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MPFO - - - C.G. S.X.
0.07 2e-20 101 Glycine max Gma.3857.1.S1_a_at BI971030 - - 3e-11 At2g23790 unknown protein C.G. S.X.
0.28 2e-76 286 Hordeum vulgare Contig5106_at Contig5106 - - 3e-8 At5g66650 unknown protein C.G. S.X.
0.09 3e-13 77 Populus trichocarpa PtpAffx.99728.2.A1_at BP933722 - - 6e-2 At2g23790 unknown protein C.G. S.X.
0.37 1e-92 341 Triticum aestivum Ta.15682.1.S1_at CA486291 - - 3e+0 At3g09032 unknown protein C.G. S.X.
0.03 2e-4 46 Vitis vinifera 1617242_at CF211993 hypothetical protein LOC100255381 - 2e-4 At1g09575 unknown protein C.G. S.X.
0.19 9e-51 200 Zea mays Zm.14703.2.A1_a_at CF634914 hypothetical protein LOC100194060 - 3e-7 At5g66650 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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