CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0499800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0499800 AK099535.1 - Fertility restorer 1e-1 At4g35710 unknown protein S.X. H.G.
0.24 22.4 Os11g0208100 AK101043.1 - Cyclin-like F-box domain containing protein 1e+0 At2g20362 unknown protein S.X. H.G.
0.07 3.7 Os10g0381200 9638.m01990 - - 2e+0 At5g20110 dynein light chain, putative S.X. H.G.
0.05 2.5 Os11g0617800 AK062778.1 - Hypothetical protein 2e+0 At1g75190 unknown protein S.X. H.G.
0.04 2.0 Os12g0147000 9640.m00437 - Protein of unknown function DUF296 domaincontaining protein 5e-1 At4g00200 DNA binding S.X. H.G.
0.04 2.0 Os12g0102300 AY341860.1 - WRKY transcription factor 57 3e-3 At5g07100 WRKY26 S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
40.1 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
40.0 99.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.9 99.8 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.7 99.3 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.5 99.3 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.9 99.2 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 7e-150 531 Os10g0499500 AK069398.1 - Fertility restorer 8e-2 At4g35710 unknown protein C.G. S.X.
0.25 0 644 Os10g0495200 AK102771.1 - Fertility restorer 3e-1 At4g35710 unknown protein C.G. S.X.
0.15 3e-146 519 Os10g0497300 AK064770.1 - Conserved hypothetical protein 6e-1 At5g39710 EMB2745 (EMBRYO DEFECTIVE 2745) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-1 38 Arabidopsis thaliana At4g35710 829723 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P - - - C.G. S.X.
0.02 3e+0 34 Glycine max PsAffx.psZS009xK17f_at PsAffx.psZS009xK17f - - 5e+0 At3g51380 IQD20 (IQ-domain 20) C.G. S.X.
0.03 1e+0 34 Hordeum vulgare Contig6339_s_at Contig6339 - - 2e+0 At1g14450 unknown protein C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.210018.1.S1_at pmrna19751 hypothetical protein - 8e-1 At2g11773 unknown protein C.G. S.X.
0.03 6e-1 36 Triticum aestivum Ta.2827.2.S1_at CA677033 - - 2e-2 At1g05300 ZIP5 C.G. S.X.
0.02 2e-1 36 Vitis vinifera 1622083_at BQ797832 hypothetical protein LOC100265922 - 5e-6 At4g34430 CHB3 C.G. S.X.
0.02 4e+0 32 Zea mays ZmAffx.695.1.A1_at AI737430 hypothetical protein LOC100192562 - 2e-1 At3g45248 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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