CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0482900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os10g0482900 AK071332.1 - Glutaredoxin domain containing protein 3e-4 At3g11920 glutaredoxin-related S.X. H.G.
0.77 93.1 Os05g0486100 AK119823.1 - Protein kinase domain containing protein 7e-9 At5g49760 leucine-rich repeat family protein / protein kinase family protein S.X. H.G.
0.77 93.1 Os09g0472100 AK120390.1 - ABC transporter 2e-2 At1g51500 CER5 (ECERIFERUM 5) S.X. H.G.
0.67 87.2 Os11g0669100 AK068628.1 - Hypothetical protein 5e+0 At5g35620 LSP1 (LOSS OF SUSCEPTIBILITY TO POTYVIRUS 1) S.X. H.G.
0.42 53.9 Os01g0750600 NM_191238.1 - Protein kinase domain containing protein 4e-3 At3g18810 protein kinase family protein S.X. H.G.
0.36 44.0 Os01g0609900 AK121722.1 - PDR-like ABC transporter (PDR4 ABC transporter) 8e-22 At1g15520 PDR12 (PLEIOTROPIC DRUG RESISTANCE 12) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
42.2 99.9 GSM154829 Root_DMSO-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
37.3 99.8 GSM154831 Root_DMSO-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
33.5 99.8 GSM154832 Root_DMSO-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
18.0 98.9 GSM154939 Root_DMSO-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
16.0 98.7 GSM154941 Root_DMSO-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
13.5 98.5 GSM154940 Root_DMSO-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
12.9 98.4 GSM154943 Root_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
9.5 97.9 GSM431928 Root- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
9.4 97.9 GSM375767 gid1-3_ shoot_replicate 3 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
9.1 97.9 GSM375766 gid1-3_ shoot_replicate 2 GSE15046 Transcriptome analysis of gibberellin-signaling mutants in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-2 44 Os01g0806250 NM_190989.1 - - 1e+1 At4g25840 GPP1 (glycerol-3-phosphatase 1) C.G. S.X.
0.01 2e-4 50 Os04g0432100 9632.m03390 - GRAS transcription factor domain containingprotein 8e-1 At5g65495 unknown protein C.G. S.X.
0.01 3e-3 46 Os01g0586100 9629.m03854 - - 3e+0 At5g57340 unknown protein C.G. S.X.
0.01 1e-2 44 Os01g0806300 AK111352.1 - Conserved hypothetical protein 2e+0 At2g25780 unknown protein C.G. S.X.
0.01 4e-2 42 Os08g0437300 9636.m03403 - Conserved hypothetical protein 5e-7 At4g38620 MYB4 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 3e-4 48 Arabidopsis thaliana At3g11920 820365 glutaredoxin-related F:electron carrier activity, protein disulfide oxidoreductase activity;P:intracellular signaling cascade, cell redox homeostasis;C:cellular_component unknown;BOMPF - - - C.G. S.X.
0.02 3e-2 42 Glycine max PsAffx.psMA011xO10f_s_at PsAffx.psMA011xO10f - - 3e+0 At5g17840 chaperone protein dnaJ-related C.G. S.X.
0.22 4e-79 295 Hordeum vulgare Contig24922_at Contig24922 - - 5e+0 At2g21960 unknown protein C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.223161.1.S1_at pmrna41026 hypothetical protein - 9e+0 At1g15840 unknown protein C.G. S.X.
0.01 2e-2 42 Triticum aestivum TaAffx.112520.1.S1_at CA623278 - - 5e-6 At3g45980 HTB9 C.G. S.X.
0.01 4e-1 36 Vitis vinifera 1620744_at CF403966 hypothetical protein LOC100248911 - 2e-6 At1g20340 DRT112 C.G. S.X.
0.01 1e-1 38 Zea mays ZmAffx.968.1.S1_at AI833843 - - 2e+0 At5g67110 ALC (ALCATRAZ) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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