CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0482500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.73 91.1 Os10g0482500 NM_197048.1 - - 1e+0 At4g38410 dehydrin, putative S.X. H.G.
0.53 71.3 Os09g0391600 9637.m01951 - - 1e+0 At1g43560 Aty2 (Arabidopsis thioredoxin y2) S.X. H.G.
0.50 68.0 Os07g0416100 AK063097.1 - Conserved hypothetical protein 3e+0 At2g41290 strictosidine synthase family protein S.X. H.G.
0.48 63.7 Os03g0195500 AK111395.1 - Sulfate permease (Fragment) 8e-10 At5g10180 AST68 S.X. H.G.
0.44 58.1 Os08g0308000 9636.m02115 - - 2e+0 At2g16900 - S.X. H.G.
0.42 53.9 Os02g0268050 9630.m01571 - - 1e-1 At2g40610 ATEXPA8 (ARABIDOPSIS THALIANA EXPANSIN A8) S.X. H.G.
0.39 48.3 Os12g0115800 9640.m00141 - - 8e+0 At5g09640 SCPL19 S.X. H.G.
0.39 48.3 Os05g0264100 9633.m01613 - - 3e+0 At3g03870 unknown protein S.X. H.G.
0.37 45.0 Os06g0311150 NM_184661.1 - - 4e-1 At1g50930 unknown protein S.X. H.G.
0.33 38.8 Os01g0967250 NM_191494.1 - - 1e-1 At4g02465 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.2 99.8 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.0 99.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.1 99.7 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.5 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.2 99.5 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.0 99.5 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.6 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.5 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-2 40 Os12g0197000 9640.m00890 - - 2e-1 At1g68580 agenet domain-containing protein / bromo-adjacent homology (BAH) domain-containing protein C.G. S.X.
0.02 3e-3 44 Os06g0548000 D67043.1 - Mitochondrial aspartate aminotransferase precursor(EC 2.6.1.1) 4e-46 At2g30970 ASP1 (ASPARTATE AMINOTRANSFERASE 1) C.G. S.X.
0.02 4e-2 40 Os02g0132500 AK070887.1 - BZIP transcription factor 1e-8 At4g34588 CPuORF2 (Conserved peptide upstream open reading frame 2) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 34 Arabidopsis thaliana At4g38410 829998 dehydrin, putative F:molecular_function unknown;P:response to water, response to stress;C:cellular_component unknown;POMFBA - - - C.G. S.X.
0.04 2e+0 34 Glycine max GmaAffx.13988.1.S1_s_at BI700279 - - 1e-2 At3g52920 unknown protein C.G. S.X.
0.03 3e+0 32 Hordeum vulgare HV02A24u_at HV02A24u - - 3e+0 At3g62840 - C.G. S.X.
0.03 2e+0 34 Populus trichocarpa PtpAffx.249.536.S1_at CV250374 - - 1e+0 At5g53180 PTB2 (POLYPYRIMIDINE TRACT-BINDING PROTEIN 2) C.G. S.X.
0.03 6e+0 32 Triticum aestivum TaAffx.112518.1.S1_at CA623318 - - 7e-1 At5g38895 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1618674_at CA812358 hypothetical protein LOC100256861 - 1e+0 At5g14105 unknown protein C.G. S.X.
0.03 1e+1 30 Zea mays ZmAffx.1420.1.S1_at 40794996-95 - - 5e-2 At2g07706 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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