CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0481100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os10g0481100 AK106746.1 - Aquaporin PIP2.1 (Plasma membrane intrinsicprotein 2a) (PIP2a) 2e-7 At2g37180 RD28 (RESPONSIVE TO DESICCATION 28) S.X. H.G.
0.40 51.1 Os02g0689000 AK109306.1 - Plant invertase/pectin methylesterase inhibitordomain containing protein 8e+0 At5g22390 unknown protein S.X. H.G.
0.29 31.1 Os04g0457300 AK061416.1 - Protein of unknown function DUF6 domain containingprotein 2e-4 At1g66620 seven in absentia (SINA) protein, putative S.X. H.G.
0.21 17.9 Os03g0347700 AK110492.1 - NPH3 domain containing protein 1e-9 At2g47860 phototropic-responsive NPH3 family protein S.X. H.G.
0.18 13.7 Os08g0486700 9636.m03821 - Conserved hypothetical protein 7e-3 At5g67060 HEC1 (HECATE 1) S.X. H.G.
0.17 12.6 Os11g0270500 AK110480.1 - Disease resistance protein family protein 2e-2 At3g59300 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
46.2 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
22.2 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.0 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.3 99.2 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.1 99.1 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.8 99.1 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.6 99.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
19.4 99.0 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.9 98.9 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.49 1e-64 248 Os07g0448100 NM_187082.1 - Plasma membrane integral protein ZmPIP2-6 9e-30 At2g37180 RD28 (RESPONSIVE TO DESICCATION 28) C.G. S.X.
0.43 9e-56 218 Os04g0521100 9632.m04226 - Plasma membrane intrinsic protein (Aquaporin) 1e-42 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) C.G. S.X.
0.41 5e-54 212 Os02g0629200 AK120386.1 - Plasma membrane integral protein ZmPIP2-3 1e+0 At2g37180 RD28 (RESPONSIVE TO DESICCATION 28) C.G. S.X.
0.31 1e-57 224 Os07g0448400 AK107700.1 - Plasma membrane integral protein ZmPIP2-6 1e-25 At3g53420 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A) C.G. S.X.
0.30 3e-52 206 Os07g0448800 AK103938.1 - Aquaporin 1e-15 At3g54820 PIP2 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 9e-5 48 Arabidopsis thaliana At2g37180 818294 RD28 (RESPONSIVE TO DESICCATION 28) a member of the plasma membrane intrinsic protein PIP2. functions as aquaporin and is involved in dessication. - - - C.G. S.X.
0.16 1e-7 57 Glycine max Gma.11116.4.S1_s_at CD408430 - - 4e-39 At4g35100 PIP3 (PLASMA MEMBRANE INTRINSIC PROTEIN 3) C.G. S.X.
0.42 1e-64 246 Hordeum vulgare Contig1223_at Contig1223 aquaporin - 6e-38 At2g37170 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) C.G. S.X.
0.10 5e-4 46 Populus trichocarpa PtpAffx.221953.1.S1_at pmrna39083 aquaporin, MIP family, PIP subfamily - 2e-9 At1g01620 PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) C.G. S.X.
0.36 4e-41 169 Triticum aestivum TaAffx.8804.1.S1_s_at CK164001 - - 1e-11 At2g37180 RD28 (RESPONSIVE TO DESICCATION 28) C.G. S.X.
0.18 2e-9 61 Vitis vinifera 1613240_s_at CF213482 aquaporin-like - 7e-64 At1g01620 PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1C) C.G. S.X.
0.36 5e-57 220 Zea mays Zm.15890.1.A1_at AF326494.1 plasma membrane intrinsic protein2 - 9e-28 At2g37180 RD28 (RESPONSIVE TO DESICCATION 28) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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