CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0467100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.51 68.7 Os10g0467100 NM_196930.1 - - 2e-1 At4g19370 unknown protein S.X. H.G.
0.77 93.1 Os10g0138000 9638.m00396 - Cyclin-like F-box domain containing protein 1e+0 At4g21500 unknown protein S.X. H.G.
0.77 93.1 Os08g0149000 AK100458.1 - Peptidase, trypsin-like serine and cysteineproteases domain containing protein 4e-1 At3g58660 60S ribosomal protein-related S.X. H.G.
0.74 91.4 Os09g0135200 AK062455.1 - Conserved hypothetical protein 3e-1 At3g55460 SCL30 S.X. H.G.
0.73 91.1 Os03g0719700 AK065707.1 - Conserved hypothetical protein 4e-20 At1g09570 PHYA (PHYTOCHROME A) S.X. H.G.
0.72 89.8 Os08g0299400 AK064148.1 - Monogalactosyldiacylglycerol synthase familyprotein 1e-8 At2g11810 MGDC S.X. H.G.
0.69 87.9 Os05g0246700 9633.m01395 - - 9e-1 At3g57160 unknown protein S.X. H.G.
0.67 87.2 Os06g0287000 9634.m01779 - Disease resistance protein family protein 2e+0 At4g38100 unknown protein S.X. H.G.
0.64 83.4 Os10g0433700 AK065401.1 - Conserved hypothetical protein 2e+0 At3g06410 nucleic acid binding / zinc ion binding S.X. H.G.
0.55 73.7 Os12g0172100 9640.m00670 - - 5e-1 At4g30460 glycine-rich protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
62.6 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
35.6 99.8 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.6 99.6 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.0 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.9 99.6 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.5 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.1 99.4 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.5 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 8e-8 59 Os10g0467000 AK107743.1 - Conserved hypothetical protein 4e-1 At1g07950 surfeit locus protein 5 family protein / SURF5 family protein C.G. S.X.
0.07 2e-2 42 Os08g0199900 9636.m00956 - - 4e+0 At5g66980 transcriptional factor B3 family protein C.G. S.X.
0.06 8e-8 59 Os10g0466800 AK108440.1 - Conserved hypothetical protein 3e-2 At3g59640 glycine-rich protein C.G. S.X.
0.02 3e-1 38 Os01g0946800 NM_186132.1 - Cold shock protein-1 4e-1 At4g26230 60S ribosomal protein L31 (RPL31B) C.G. S.X.
0.00 8e-2 40 Os04g0675400 AK068186.1 - Heat shock protein DnaJ family protein 9e-1 At2g28710 zinc finger (C2H2 type) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e-1 38 Arabidopsis thaliana At4g19370 827678 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P - - - C.G. S.X.
0.02 3e+0 34 Glycine max GmaAffx.61929.1.A1_at AW164784 - - 2e-1 At3g06890 unknown protein C.G. S.X.
0.02 5e-3 42 Hordeum vulgare HVSMEb0004H19r2_at HVSMEb0004H19r2 - - 3e-1 At2g21180 unknown protein C.G. S.X.
0.02 3e+0 34 Populus trichocarpa PtpAffx.147634.1.A1_at CV230335 glutamate-gated kainate-type ion channel receptor subunit GluR5 - 5e-1 At4g35290 GLUR2 (GLUTAMATE RECEPTOR 2) C.G. S.X.
0.03 6e-1 36 Triticum aestivum Ta.20089.1.S1_at CA666803 - - 1e+1 At2g40110 yippee family protein C.G. S.X.
0.02 7e-1 34 Vitis vinifera 1610508_at BQ794347 hypothetical protein LOC100253402 - 1e-9 At3g44620 protein tyrosine phosphatase C.G. S.X.
0.02 1e+0 34 Zea mays Zm.4668.1.S1_at BE575054 hypothetical protein LOC100275065 - 1e+1 At3g19630 radical SAM domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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