CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0464000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0464000 AK103475.1 - Hypersensitive-induced response protein 2e-22 At5g62740 band 7 family protein S.X. H.G.
0.73 91.1 Os11g0428800 CF291095 - Plastocyanin-like domain containing protein 1e+1 At5g35470 unknown protein S.X. H.G.
0.67 87.2 Os03g0233900 U76030.1 - Non-symbiotic hemoglobin 1 (rHb1) (ORYsa GLB1a) 2e+0 At1g30260 - S.X. H.G.
0.67 87.2 Os12g0571000 9640.m03722 - Metallothionein-like protein type 1 1e-1 At4g13850 GR-RBP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2) S.X. H.G.
0.44 58.1 Os06g0724900 AK073747.1 - Amino acid-binding ACT domain containing protein 4e-12 At4g35780 protein kinase family protein S.X. H.G.
0.40 51.1 Os12g0568500 9640.m03698 - Metallothionein-like protein type 1 2e-2 At5g25490 zinc finger (Ran-binding) family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
25.8 99.5 GSM359902 FL478 root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
23.4 99.4 GSM359903 FL478 root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
15.6 98.7 GSM359920 Pokkali root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
14.8 98.6 GSM359922 Pokkali root, salt-treated, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
14.2 98.5 GSM154944 Root_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
14.1 98.5 GSM154942 Root_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
13.5 98.5 GSM154937 Root_tZ-treatment_30min_replicate 2 GSE6719 Cytokinin responsive genes in rice
13.4 98.5 GSM359914 IR63731 root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
13.0 98.4 GSM359916 IR63731 root, salt-treated, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
12.8 98.4 GSM154833 Root_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.31 1e-56 222 Os08g0398400 AF374475.1 - Hypersensitive-induced reaction protein 1 7e-35 At5g62740 band 7 family protein C.G. S.X.
0.27 2e-45 184 Os05g0591900 AK072258.1 - Hypersensitive-induced response protein 3e-46 At5g62740 band 7 family protein C.G. S.X.
0.04 2e-18 95 Os03g0435200 AK120095.1 - TPR-like domain containing protein 2e-3 At4g39952 pentatricopeptide (PPR) repeat-containing protein C.G. S.X.
0.02 2e-2 42 Os01g0269000 AK068875.1 - Hydroxymethylglutaryl-CoA lyase 4e-6 At2g26800 hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.34 2e-22 107 Arabidopsis thaliana At5g62740 836395 band 7 family protein F:unknown;P:N-terminal protein myristoylation;C:plasma membrane, vacuole, membrane;BOMFPAV - - - C.G. S.X.
0.26 2e-14 81 Glycine max Gma.12381.1.S1_x_at BU547775 - - 1e-36 At5g62740 band 7 family protein C.G. S.X.
0.36 8e-42 171 Hordeum vulgare Contig3626_s_at Contig3626 - - 2e-32 At5g62740 band 7 family protein C.G. S.X.
0.39 1e-46 188 Populus trichocarpa Ptp.3805.1.S1_at CV274329 hypothetical protein - 2e-56 At5g62740 band 7 family protein C.G. S.X.
0.34 2e-44 180 Triticum aestivum Ta.3253.1.S1_at BJ276858 hypersensitive induced response protein 3 - 2e-38 At5g62740 band 7 family protein C.G. S.X.
0.26 9e-19 93 Vitis vinifera 1614233_at CA814450 hypothetical protein LOC100253479 - 1e-26 At5g62740 band 7 family protein C.G. S.X.
0.31 2e-27 123 Zea mays Zm.303.1.S1_at AF236373.1 hypersensitive induced reaction1 - 1e-42 At5g62740 band 7 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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