CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0459700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0459700 AK110328.1 - Xyloglucan galactosyltransferase 7e-2 At4g13990 exostosin family protein S.X. H.G.
0.73 91.1 Os04g0494600 AK110895.1 - Protein of unknown function DUF642 family protein 5e-2 At3g17410 serine/threonine protein kinase, putative S.X. H.G.
0.67 87.2 Os07g0524900 AK071512.1 - Protein of unknown function DUF6 domain containingprotein 3e+0 At4g16240 unknown protein S.X. H.G.
0.67 87.2 Os04g0467000 AK073154.1 - Conserved hypothetical protein 2e+0 At4g30850 HHP2 (HEPTAHELICAL TRANSMEMBRANE PROTEIN2) S.X. H.G.
0.46 60.9 Os02g0183000 9630.m00818 - Zinc-binding protein 2e-5 At2g12646 - S.X. H.G.
0.39 48.3 Os02g0454500 AK064156.1 - Membrane bound O-acyl transferase, MBOAT familyprotein 5e-5 At5g55360 long-chain-alcohol O-fatty-acyltransferase family protein / wax synthase family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
31.1 99.7 GSM275416 Azucena root tip_Before the wax layer_Rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
30.1 99.7 GSM275415 Azucena root tip_Before the wax layer_Rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
25.4 99.5 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
24.5 99.4 GSM275407 Azucena root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
22.9 99.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
19.0 99.0 GSM275414 Azucena root tip_Before the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
18.3 98.9 GSM275409 Bala root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
14.8 98.6 GSM275406 Azucena root tip_At the wax layer_rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
12.3 98.3 GSM275405 Azucena root tip_At the wax layer_rep1 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
10.5 98.1 GSM359906 FL478 root, salt-treated, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.75 0 2268 Os10g0459600 AK110989.1 - Xyloglucan galactosyltransferase 6e-2 At4g13990 exostosin family protein C.G. S.X.
0.19 7e-22 107 Os03g0144300 AK073950.1 - Exostosin-like family protein 2e-1 At2g20370 MUR3 (MURUS 3) C.G. S.X.
0.14 3e-24 115 Os03g0144500 AK122034.1 - The start codon is not identified. 1e-2 At2g20370 MUR3 (MURUS 3) C.G. S.X.
0.12 2e-28 129 Os10g0458900 9638.m02782 - Exostosin-like family protein 1e+1 At1g01640 speckle-type POZ protein-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 7e-2 40 Arabidopsis thaliana At4g13990 827035 exostosin family protein F:catalytic activity;P:biological_process unknown;C:cell wall, membrane;POM - - - C.G. S.X.
0.02 2e-2 42 Glycine max GmaAffx.53962.1.S1_at BU547803 - - 2e-16 At5g62220 exostosin family protein C.G. S.X.
0.10 3e-18 93 Hordeum vulgare HU05I15r_at HU05I15r - - 3e-1 At1g69840 band 7 family protein C.G. S.X.
0.02 2e+0 36 Populus trichocarpa PtpAffx.220680.1.S1_at pmrna37090 hypothetical protein - 1e+1 At5g07190 ATS3 (ARABIDOPSIS THALIANA SEED GENE 3) C.G. S.X.
0.09 3e-16 87 Triticum aestivum Ta.16559.1.S1_at BJ283383 - - 7e+0 At5g46417 unknown protein C.G. S.X.
0.01 2e-2 40 Vitis vinifera 1613994_at BQ794302 hypothetical protein LOC100260766 - 6e-21 At2g31090 unknown protein C.G. S.X.
0.02 7e-3 42 Zea mays Zm.12777.1.A1_at CA402980 - - 3e+0 At3g06780 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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