CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0419200

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0419200 9638.m02395 - Zn-finger, C2H2 type domain containing protein 1e-5 At1g14580 zinc finger (C2H2 type) family protein S.X. H.G.
0.50 68.0 Os02g0293300 9630.m01822 - X1 (Fragment) 9e-1 At4g31351 unknown protein S.X. H.G.
0.03 1.4 Os11g0203200 9639.m00922 - - 3e-1 At5g66120 3-dehydroquinate synthase, putative S.X. H.G.
0.01 0.5 Os05g0176400 AK102679.1 - Zn-finger, C-x8-C-x5-C-x3-H type domain containingprotein 9e-1 At3g07920 translation initiation factor S.X. H.G.
0.01 0.5 Os07g0685900 AK119348.1 - Proteinase inhibitor I9, subtilisin propeptidedomain containing protein 3e-1 At5g59810 SBT5.4 S.X. H.G.
0.01 0.5 Os11g0517800 9639.m02882 - Ankyrin repeat containing protein 6e+0 At3g28210 PMZ S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
38.4 99.8 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.0 99.7 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.7 99.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
29.1 99.7 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.1 99.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
26.5 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.4 99.4 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.1 99.3 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.30 9e-51 202 Os09g0555700 AK061264.1 - Zn-finger, C2H2 type domain containing protein 2e-25 At1g14580 zinc finger (C2H2 type) family protein C.G. S.X.
0.25 3e-44 180 Os01g0935000 AK070390.1 - Zn-finger, C2H2 type domain containing protein 4e-6 At5g03150 JKD (JACKDAW) C.G. S.X.
0.25 5e-43 176 Os08g0554400 AK101181.1 - Zn-finger, C2H2 type domain containing protein 4e-25 At1g14580 zinc finger (C2H2 type) family protein C.G. S.X.
0.24 8e-45 182 Os01g0242200 AK107468.1 - Zn-finger, C2H2 type domain containing protein 4e-9 At1g03840 MGP (Magpie) C.G. S.X.
0.16 9e-51 202 Os04g0566400 CB669008 - Zn-finger, C2H2 type domain containing protein 9e-30 At1g14580 zinc finger (C2H2 type) family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 1e-5 52 Arabidopsis thaliana At1g14580 838020 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:unknown;C:intracellular;MOPFB - - - C.G. S.X.
0.24 3e-22 107 Glycine max PsAffx.psHB034xB01f_at PsAffx.psHB034xB01f - - 3e-11 At1g14580 zinc finger (C2H2 type) family protein C.G. S.X.
0.05 1e-9 63 Hordeum vulgare Contig19625_at Contig19625 - - 1e-3 At2g02070 AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5) C.G. S.X.
0.02 2e-1 38 Populus trichocarpa PtpAffx.217898.1.S1_at pmrna33346 hypothetical protein - 2e+1 At4g34620 SSR16 (SMALL SUBUNIT RIBOSOMAL PROTEIN 16) C.G. S.X.
0.24 4e-45 182 Triticum aestivum Ta.27378.1.S1_s_at CA647282 - - 9e-13 At1g14580 zinc finger (C2H2 type) family protein C.G. S.X.
0.02 5e-2 38 Vitis vinifera 1614359_at CF205427.1 - - 9e-2 At3g23860 GTP-binding protein-related C.G. S.X.
0.34 8e-94 343 Zea mays Zm.372.1.S1_at AF058757.1 indeterminate growth1 - 9e-7 At1g14580 zinc finger (C2H2 type) family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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