CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0410900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.40 51.1 Os10g0410900 AK119279.1 - Hypothetical protein 4e-1 At2g37200 integral membrane protein, putative S.X. H.G.
0.44 58.1 Os05g0583200 AK102230.1 - BED finger domain containing protein 4e-1 At5g63740 zinc finger protein-related S.X. H.G.
0.40 51.1 Os02g0159400 AK109550.1 - Hypothetical protein 8e-2 At3g46666 unknown protein S.X. H.G.
0.37 45.0 Os07g0555300 AK071161.1 - Hypothetical protein 9e-2 At3g22840 ELIP1 (EARLY LIGHT-INDUCABLE PROTEIN) S.X. H.G.
0.36 44.0 Os01g0818100 NM_191091.1 - - 2e-8 At5g01990 auxin efflux carrier family protein S.X. H.G.
0.36 44.0 Os09g0413300 9637.m02118 - TPR-like domain containing protein 3e-1 At4g02750 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.6 99.9 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
37.4 99.8 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.2 99.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
31.5 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.4 99.7 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.0 99.6 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.7 99.5 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.9 99.4 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.7 99.3 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.5 99.1 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.06 4e-24 115 Os10g0151800 AK066347.1 - - 3e-8 At4g00830 RNA recognition motif (RRM)-containing protein C.G. S.X.
0.03 2e-19 99 Os02g0825600 AK066738.1 - Plasma membrane H+ ATPase (EC 3.6.3.6) 8e-14 At5g62670 AHA11 (Arabidopsis H(+)-ATPase 11) C.G. S.X.
0.03 2e-4 50 Os04g0178400 AK071864.1 - Cytochrome P450 CYP99A1 (EC 1.14.-.-) (Fragment) 9e-1 At2g05440 glycine-rich protein C.G. S.X.
0.02 8e-13 77 Os03g0347900 AK068923.1 - Terpenoid synthase domain containing protein 2e+0 At2g42780 - C.G. S.X.
0.02 5e-8 61 Os06g0528000 NM_196265.1 - - 1e+0 At5g52570 BETA-OHASE 2 (BETA-CAROTENE HYDROXYLASE 2) C.G. S.X.
0.01 1e-5 54 Os10g0476200 AK107522.1 - Hypothetical protein 5e-8 At3g23340 ckl10 (Casein Kinase I-like 10) C.G. S.X.
0.01 2e-4 50 Os07g0553600 AK064506.1 - Conserved hypothetical protein 3e-2 At1g20650 ATP binding / protein kinase/ protein serine/threonine kinase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-1 38 Arabidopsis thaliana At2g37200 818297 integral membrane protein, putative F:molecular_function unknown;P:biological_process unknown;C:membrane;P - - - C.G. S.X.
0.01 1e-1 40 Glycine max GmaAffx.14636.1.S1_at BM886167 - - 3e+0 At5g39950 ATTRX2 (THIOREDOXIN 2) C.G. S.X.
0.02 1e-2 42 Hordeum vulgare Contig6850_at Contig6850 - - 8e-14 At1g74040 IMS1 (2-ISOPROPYLMALATE SYNTHASE 1) C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.215694.1.S1_at pmrna30044 hypothetical protein - 3e+0 At1g06980 unknown protein C.G. S.X.
0.02 2e-2 42 Triticum aestivum Ta.8651.1.A1_at BQ162173 - - 5e+0 At2g45710 40S ribosomal protein S27 (RPS27A) C.G. S.X.
0.01 1e-1 38 Vitis vinifera 1611136_at CD719348 - - 1e-13 At3g26720 glycosyl hydrolase family 38 protein C.G. S.X.
0.01 1e-2 42 Zea mays Zm.11811.1.S1_at CF052353 glycosyltransferase 5 /// glycosyltransferase 5 - 3e-10 At3g62720 XT1 (XYLOSYLTRANSFERASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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