Gene omics information

Query gene ID Os10g0406000
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.9198.9Os10g04060009638.m02270--2e-2At2g44840ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)S.X.H.G.
0.8094.6Os06g0634800NM_197662.1--3e+0At5g66580unknown proteinS.X.H.G.
0.6787.2Os05g02003009633.m00975--7e-5At1g17700PRA1.F1 (PRENYLATED RAB ACCEPTOR 1.F1)S.X.H.G.
0.6079.7Os03g06523009631.m04345--3e-1At3g50330HEC2 (HECATE 2)S.X.H.G.
0.6079.7Os12g02857009630.m01927--2e+1At5g63560transferase family proteinS.X.H.G.
0.5068.0Os04g04548019632.m03610--3e-1At1g11260STP1 (SUGAR TRANSPORTER 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
49.199.9GSM377074Genomic DNA - 45 day old leaf sample - mutant g282GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
38.999.8GSM422674Musa_DNA_RICEGSE16865Heterologous microarrays for the study of drought stress in Musa
36.199.8GSM377083Genomic DNA - 45 day old leaf sample - mutant g6989GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
33.699.8GSM377070Genomic DNA - 45 day old leaf sample - mutant d1GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
32.699.8GSM377080Genomic DNA - 45 day old leaf sample - mutant g6728GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
30.699.7GSM377078Genomic DNA - 45 day old leaf sample - mutant g6603GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
28.199.6GSM377081Genomic DNA - 45 day old leaf sample - mutant g7534GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.099.6GSM377082Genomic DNA - 45 day old leaf sample - mutant g9799GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
25.299.5GSM377085Genomic DNA - 45 day old leaf sample - mutant f2045GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.899.5GSM377076Genomic DNA - 45 day old leaf sample - mutant g6485GSE15071Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.034e-550Os07g0669500AK105365.1-Branched silkless18e-7At5g18560PUCHIC.G.S.X.
0.033e-344Os03g0663500U77656.1-Thaumatin, pathogenesis-related family protein7e+0At3g25400-C.G.S.X.
0.033e-344Os12g0580600AK108584.1-Conserved hypothetical protein6e-1At4g38860auxin-responsive protein, putativeC.G.S.X.
0.031e-242Os04g04290509632.m03363--4e-1At5g07310AP2 domain-containing transcription factor, putativeC.G.S.X.
0.023e-344Os06g0530400AB028186.1-No apical meristem (NAM) protein domain containingprotein2e-10At4g10350ANAC070 (Arabidopsis NAC domain containing protein 70)C.G.S.X.
0.013e-344Os03g0165200NM_187741.1-Pathogenesis-related transcriptional factor andERF domain containing protein2e-9At2g16390DRD1 (DEFECTIVE IN RNA-DIRECTED DNA METHYLATION 1)C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.042e-240Arabidopsis thalianaAt2g44840819093ERF13 (ETHYLENE-RESPONSIVE ELEMENT BINDING FACTOR 13)encodes a member of the ERF (ethylene response factor) subfamily B-3 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 18 members in this subfamily including ATERF-1, ATERF-2, AND ATERF-5.---C.G.S.X.
0.035e-136Glycine maxHgAffx.21177.1.S1_atBI748610--1e+1At4g04930DES-1-LIKEC.G.S.X.
0.042e-136Hordeum vulgareContig13387_atContig13387--4e-2At2g35200unknown proteinC.G.S.X.
0.032e+034Populus trichocarpaPtpAffx.220379.1.S1_atpmrna36758hypothetical protein-3e-1At3g44250CYP71B38C.G.S.X.
0.049e-238Triticum aestivumTaAffx.28787.1.S1_atCA656230--2e-1At1g07950surfeit locus protein 5 family protein / SURF5 family proteinC.G.S.X.
0.032e+032Vitis vinifera1614256_atCB002433hypothetical protein LOC100253803-2e-1At4g18620-C.G.S.X.
0.039e-340Zea maysZm.12114.1.S1_atBM379167DNA-binding protein RAV1-1e-11At1g25560TEM1 (TEMPRANILLO 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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