CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0392050

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.55 73.7 Os10g0392050 9638.m02132 - - 4e+0 At3g22110 PAC1 S.X. H.G.
0.80 94.6 Os10g0131000 NM_194724.1 - Disease resistance protein family protein 4e-1 At3g26125 CYP86C2 S.X. H.G.
0.77 93.1 Os03g0584800 NM_187869.1 - - 4e+0 At5g43640 40S ribosomal protein S15 (RPS15E) S.X. H.G.
0.60 79.7 Os10g0335050 NM_195803.1 - - 5e+0 At4g14080 MEE48 (maternal effect embryo arrest 48) S.X. H.G.
0.56 76.3 Os06g0330000 9634.m02201 - - 7e-1 At1g75690 chaperone protein dnaJ-related S.X. H.G.
0.31 34.5 Os11g0552300 9639.m03151 - - 1e-1 At5g60680 unknown protein S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
62.6 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
29.6 99.7 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.7 99.6 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
27.6 99.6 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.0 99.4 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.7 99.4 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.4 99.4 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.8 99.3 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
22.4 99.3 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.6 99.1 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.59 2e-105 383 Os03g0704300 9631.m04853 - - 4e+0 At4g00170 vesicle-associated membrane family protein / VAMP family protein C.G. S.X.
0.12 1e-20 101 Os06g0657901 NM_193102.1 - - 2e-1 At5g11930 glutaredoxin family protein C.G. S.X.
0.08 1e-26 121 Os04g0627900 AK108443.1 - The start codon is not identified. 8e-9 At5g54940 eukaryotic translation initiation factor SUI1, putative C.G. S.X.
0.08 1e-26 121 Os04g0628000 AK064525.1 - Arabidopsis thaliana protein of unknown functionDUF794 family protein 6e-2 At3g23930 unknown protein C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 4e+0 32 Arabidopsis thaliana At3g22110 821774 PAC1 Encodes the alpha-3 subunit of 20s proteasome. - - - C.G. S.X.
0.03 2e+0 34 Glycine max PsAffx.psMA008xN03f_at PsAffx.psMA008xN03f - - 1e-2 At5g44340 TUB4 C.G. S.X.
0.03 2e+0 32 Hordeum vulgare HI07A17r_at HI07A17r - - 3e-1 At5g41160 ATPUP12 C.G. S.X.
0.03 4e-1 36 Populus trichocarpa Ptp.5119.1.S1_s_at CV242459 ATP/ADP transporter - 9e-14 At1g80300 NTT1 (NUCLEOTIDE TRANSPORTER 1) C.G. S.X.
0.05 3e-1 36 Triticum aestivum TaAffx.112266.1.S1_x_at CA625434 - - 3e-8 At2g46030 UBC6 (ubiquitin-conjugating enzyme 6) C.G. S.X.
0.03 1e+0 32 Vitis vinifera 1620973_s_at BQ798594 hypothetical protein LOC100265749 - 4e+0 At3g22415 unknown protein C.G. S.X.
0.08 5e-4 44 Zea mays Zm.13801.1.S1_at AY104850.1 - - 4e+0 At5g40730 AGP24 C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage