Gene omics information

Query gene ID Os10g0390800
Gene name
Organism Oryza sativa


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionEvAGI codeArabidopsis gene nameS.X.H.G.Other DB
0.7088.4Os10g0390800AK110269.1--2e-4At1g22985AP2 domain-containing transcription factor, putativeS.X.H.G.
0.9699.7Os12g0197100AK071816.1-Phosphoribosylamine--glycine ligase, chloroplastprecursor (EC 6.3.4.13) (GARS) (Glycinamideribonucleotide synthetase) (Phosphoribosylglycinamidesynthetase)5e-15At1g09830phosphoribosylamine--glycine ligase (PUR2)S.X.H.G.
0.9299.1Os05g0578500AK062591.1-Conserved hypothetical protein7e-1At1g62240unknown proteinS.X.H.G.
0.9198.9Os06g0683800AK110639.1-Hypothetical protein1e+0At5g21020-S.X.H.G.
0.9198.9Os12g05413009640.m03446-Respiratory burst oxidase homolog2e-3At1g09090ATRBOHB (respiratory burst oxidase homolog B)S.X.H.G.
0.8796.6Os02g0467600AK072588.1-Cinnamate 4-hydroxylase CYP731e-2At2g30490C4H (CINNAMATE-4-HYDROXYLASE)S.X.H.G.
0.8796.6Os01g0847100AK063795.1-Hypothetical protein4e-1At5g16430-S.X.H.G.
0.8696.4Os07g0194500AK121816.1-2OG-Fe(II) oxygenase domain containing protein4e-2At5g18900oxidoreductase, 2OG-Fe(II) oxygenase family proteinS.X.H.G.
0.8395.8Os08g01520009636.m00490--6e-4At2g29870major intrinsic family protein / MIP family proteinS.X.H.G.
0.8395.8Os08g0178500AK107865.1-Conserved hypothetical protein4e+0At4g34410RRTF1 ({REDOX RESPONSIVE TRANSCRIPTION FACTOR 1)S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
62.899.9GSM154937Root_tZ-treatment_30min_replicate 2GSE6719Cytokinin responsive genes in rice
59.299.9GSM154833Root_tZ-treatment_30min_replicate 1GSE6719Cytokinin responsive genes in rice
52.399.9GSM154938Root_tZ-treatment_30min_replicate 3GSE6719Cytokinin responsive genes in rice
42.699.9GSM154944Root_tZ-treatment_120min_replicate 3GSE6719Cytokinin responsive genes in rice
33.199.8GSM154942Root_tZ-treatment_120min_replicate 1GSE6719Cytokinin responsive genes in rice
28.899.6GSM154943Root_tZ-treatment_120min_replicate 2GSE6719Cytokinin responsive genes in rice
12.098.3GSM359916IR63731 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.798.0GSM359918IR63731 root, salt-treated, biological replicate 3GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
9.197.9GSM359905FL478 root, salt-treated, biological replicate 1GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
6.097.0GSM359903FL478 root, control, biological replicate 2GSE14403Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.084e-1687Os03g0183300AK058349.1-Pathogenesis-related transcriptional factor andERF domain containing protein4e+0At5g46873-C.G.S.X.
0.074e-1687Os01g0657400AY323486.1-Ethylene responsive element binding factor 5(AtERF5)9e-3At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.062e-1895Os01g0313300AK111775.1-Transcription factor EREBP12e-6At3g14230RAP2.2C.G.S.X.
0.066e-1583Os07g0674800AY297447.1-AP2 domain containing protein RAP2.2 (Fragment)8e-3At4g17500ATERF-1 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1)C.G.S.X.
0.054e-1997Os05g04371009633.m03366-Pathogenesis-related transcriptional factor andERF domain containing protein2e-6At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.044e-1687Os01g0224100AK106517.1-Ethylene-responsive element binding factor4e-3At4g17490ATERF6 (ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 6)C.G.S.X.
0.032e-1791Os08g0537900AK119425.1-AP2 domain containing protein RAP2.2 (Fragment)6e-12At1g52630unknown proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.052e-448Arabidopsis thalianaAt1g22985838906AP2 domain-containing transcription factor, putativeencodes a member of the ERF (ethylene response factor) subfamily B-5 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 7 members in this subfamily.---C.G.S.X.
0.054e-963Glycine maxGmaAffx.60303.1.S1_atBM886518--7e-11At1g22985AP2 domain-containing transcription factor, putativeC.G.S.X.
0.119e-1477Hordeum vulgareContig6526_atContig6526--7e-1At5g11550bindingC.G.S.X.
0.042e-138Populus trichocarpaPtpAffx.207270.1.S1_atpmrna14427AP2/ERF domain-containing transcription factor-1e-3At1g43160RAP2.6 (related to AP2 6)C.G.S.X.
0.111e-1171Triticum aestivumTa.10130.1.S1_atCK198845--8e-1At2g40220ABI4 (ABA INSENSITIVE 4)C.G.S.X.
0.042e-136Vitis vinifera1613698_atCF403989hypothetical protein LOC100242632-7e-6At5g51190AP2 domain-containing transcription factor, putativeC.G.S.X.
0.062e-2099Zea maysZm.11441.1.S1_atAY672654.1ethylene-responsive factor-like protein 1-2e+0At3g14230RAP2.2C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006355Any process that modulates the frequency, rate or extent of DNA-dependent transcription.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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