CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0389800

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.50 68.0 Os10g0389800 NM_196278.1 - Protein kinase domain containing protein 2e-8 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) S.X. H.G.
0.64 83.4 Os07g0208500 AK072356.1 - Cellulose synthase-4 3e-82 At5g05170 CEV1 (CONSTITUTIVE EXPRESSION OF VSP 1) S.X. H.G.
0.61 81.2 Os03g0775200 AK120397.1 - Putative methyltransferase DUF248 family protein 4e-10 At1g19430 dehydration-responsive protein-related S.X. H.G.
0.60 79.7 Os07g0462200 AK059964.1 - Protein of unknown function DUF1218 family protein 3e-2 At1g13380 unknown protein S.X. H.G.
0.59 78.0 Os02g0164300 AK063785.1 - Glycosyl transferase, family 31 protein 2e-19 At2g32430 galactosyltransferase family protein S.X. H.G.
0.58 77.0 Os09g0533900 AK100449.1 - Endo-beta-1,4-glucanase (EC 3.2.1.4) (Fragment) 2e-8 At1g75680 AtGH9B7 (Arabidopsis thaliana glycosyl hydrolase 9B7) S.X. H.G.
0.57 77.0 Os09g0494200 AK069564.1 - Glycoside hydrolase, family 19 protein 4e-6 At3g16920 chitinase S.X. H.G.
0.50 68.0 Os05g0386800 AK070472.1 - - 2e-17 At5g60920 COB (COBRA) S.X. H.G.
0.47 62.3 Os08g0505200 AK067190.1 - Conserved hypothetical protein 4e-10 At2g42320 nucleolar protein gar2-related S.X. H.G.
0.44 58.1 Os01g0631100 AK103098.1 - Conserved hypothetical protein 2e-30 At5g46340 O-acetyltransferase-related S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
15.5 98.7 GSM159203 Inflorescence (P5, 15 - 22 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
14.4 98.6 GSM159202 Inflorescence (P5, 15 - 22 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
13.9 98.5 GSM159201 Inflorescence (P5, 15 - 22 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
8.0 97.6 GSM262000 IAC165, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
6.8 97.3 GSM262003 IAC165, 4 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.8 97.0 GSM262002 IAC165, 4 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.6 96.9 GSM262001 IAC165, 2 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.5 96.8 GSM262010 Nipponbare, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.5 96.8 GSM262015 Nipponbare, 4 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
5.4 96.8 GSM159187 SAM, biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.50 3e-58 228 Os03g0183800 AK100621.1 - - 9e-8 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
0.18 1e-20 103 Os03g0397700 AK111635.1 - Serine/threonine protein kinase-like protein(Strubbelig receptor family 7) 1e-3 At1g53730 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6) C.G. S.X.
0.17 4e-42 174 Os07g0618400 AK111671.1 - Protein kinase domain containing protein 4e-4 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) C.G. S.X.
0.16 1e-41 173 Os07g0618500 AK068975.1 - Folate synthesis protein precursor [INCLUDES:2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase (EC 2.7.6.3) (HPPK) 7e-6 At1g53450 unknown protein C.G. S.X.
0.05 4e-8 61 Os02g0190500 AK111710.1 - Leucine-rich repeat transmembrane protein kinase 2 2e-18 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.03 2e-10 69 Os06g0634500 AK111551.1 - Protein kinase domain containing protein 1e-13 At4g22130 SRF8 (STRUBBELIG-RECEPTOR FAMILY 8) C.G. S.X.
0.01 4e-8 61 Os01g0816600 NM_191078.1 - Protein kinase domain containing protein 3e-7 At5g49780 ATP binding / kinase/ protein serine/threonine kinase C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-8 61 Arabidopsis thaliana At3g14350 820655 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cytosol, nucleus, plasma membrane;MPOBFVA - - - C.G. S.X.
0.10 1e-7 59 Glycine max Gma.8678.1.S1_at BE823227 - - 9e-37 At1g53730 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6) C.G. S.X.
0.22 2e-25 117 Hordeum vulgare Contig15403_at Contig15403 - - 6e-7 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) C.G. S.X.
0.17 2e-6 56 Populus trichocarpa Ptp.2221.1.A1_at CV231780 hypothetical protein - 9e-40 At1g53730 SRF6 (STRUBBELIG-RECEPTOR FAMILY 6) C.G. S.X.
0.22 9e-57 222 Triticum aestivum Ta.29363.1.S1_at BJ263473 - - 2e-6 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
0.09 4e-10 65 Vitis vinifera 1619614_at CF372273 hypothetical protein LOC100249831 - 2e-36 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
0.49 2e-120 432 Zea mays Zm.383.1.S1_s_at AF023165.1 leucine-rich repeat transmembrane protein kinase 2 - 1e-22 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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