CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0369900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0369900 AK069323.1 - Myo-inositol-1-phosphate synthase 5e-49 At5g10170 MIPS3 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3) S.X. H.G.
0.83 95.8 Os05g0588500 AK069614.1 - MtN3 and saliva related transmembrane proteinfamily protein 2e-1 At5g62850 AtVEX1 (VEGETATIVE CELL EXPRESSED1) S.X. H.G.
0.80 94.6 Os09g0572600 AK070226.1 - Receptor protein kinase-like protein 8e-1 At1g26970 protein kinase, putative S.X. H.G.
0.55 73.7 Os05g0485800 AK108702.1 - Pollen-specific protein NTP303 precursor 6e-1 At3g13390 sks11 (SKU5 Similar 11) S.X. H.G.
0.53 71.3 Os07g0274400 AK100692.1 - B12D family protein 5e+0 At3g48140 senescence-associated protein, putative S.X. H.G.
0.40 51.1 Os04g0282200 AK105498.1 - Conserved hypothetical protein 8e-1 At4g33985 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
381.5 100.0 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
18.5 99.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
17.0 98.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.7 90.6 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
1.2 86.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.1 85.9 GSM159206 Inflorescence (P6, 22 - 30 cm), biological rep 3 GSE6893 Expression data for reproductive development in rice
0.8 81.7 GSM377080 Genomic DNA - 45 day old leaf sample - mutant g6728 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.8 81.7 GSM159204 Inflorescence (P6, 22 - 30 cm), biological rep 1 GSE6893 Expression data for reproductive development in rice
0.7 79.9 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.7 79.9 GSM159205 Inflorescence (P6, 22 - 30 cm), biological rep 2 GSE6893 Expression data for reproductive development in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.60 0 983 Os03g0192700 AB012107.1 - Myo-inositol-1-phosphate synthase 9e-100 At4g39800 MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1) C.G. S.X.
0.01 4e-2 42 Os02g0814000 AK060071.1 - Eukaryotic protein of unknown function DUF862family protein 2e-7 At3g07090 unknown protein C.G. S.X.
0.01 4e-2 42 Os10g0411800 AK059434.1 - Ribosomal protein S17 7e-9 At5g04800 40S ribosomal protein S17 (RPS17D) C.G. S.X.
0.01 1e-1 40 Os06g0612900 9634.m03944 - Conserved hypothetical protein 4e-7 At5g12960 catalytic C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.36 5e-49 196 Arabidopsis thaliana At5g10170 830881 MIPS3 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3) myo-inositol-1-phosphate synthase isoform 3.Expressed in leaf, root and silique. Immunolocaliazation experiments with an antibody recognizing MIPS1, MIPS2, and MIPS3 showed endosperm localization. - - - C.G. S.X.
0.36 7e-52 206 Glycine max Gma.15564.1.S1_at AF293970.1 Myo-inositol-1-phosphate synthase - 2e-100 At5g10170 MIPS3 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 3) C.G. S.X.
0.60 0 1019 Hordeum vulgare Contig3592_at Contig3592 - - 4e-83 At4g39800 MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1) C.G. S.X.
0.32 9e-70 266 Populus trichocarpa Ptp.858.1.S1_at CV256345 hypothetical protein - 4e-138 At2g22240 MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2) C.G. S.X.
0.58 0 1045 Triticum aestivum Ta.28254.1.S1_s_at BJ274136 - - 3e-115 At4g39800 MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1) C.G. S.X.
0.44 7e-104 377 Vitis vinifera 1613429_s_at CB974870 hypothetical protein LOC100259515 - 0 At2g22240 MIPS2 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 2) C.G. S.X.
0.54 2e-179 628 Zea mays Zm.2986.1.A1_at AF056326.1 low phytic acid1 - 4e-105 At4g39800 MIPS1 (MYO-INOSITOL-1-PHOSTPATE SYNTHASE 1) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006021 The chemical reactions and pathways resulting in the formation of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.
L GO:0008654 The chemical reactions and pathways resulting in the formation of phospholipids, any lipid containing phosphoric acid as a mono- or diester.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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