CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0365900

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0365900 9638.m01861 - - 6e+0 At3g20070 TTN9 (TITAN9) S.X. H.G.
0.73 91.1 Os09g0319800 AK066759.1 - Terpenoid cylases/protein prenyltransferasealpha-alpha toroid domain containing protein 6e-1 At4g19910 Toll-Interleukin-Resistance (TIR) domain-containing protein S.X. H.G.
0.67 87.2 Os01g0879600 9629.m06520 - - 4e-1 At5g60140 transcriptional factor B3 family protein S.X. H.G.
0.67 87.2 Os08g0262800 9636.m01637 - - 7e-2 At5g07110 PRA1.B6 (PRENYLATED RAB ACCEPTOR 1.B6) S.X. H.G.
0.53 71.3 Os11g0501300 9639.m02775 - - 4e-1 At1g65541 unknown protein S.X. H.G.
0.47 62.3 Os10g0344100 9638.m01680 - - 5e+0 At5g05950 MEE60 (maternal effect embryo arrest 60) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
302.9 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
118.5 100.0 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
1.1 85.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
0.5 75.4 GSM377083 Genomic DNA - 45 day old leaf sample - mutant g6989 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
0.4 72.6 GSM262005 IAC165, 4 days after infection with S. hermonthica, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
0.3 69.2 GSM262016 Nipponbare, 4 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
0.2 65.2 GSM261999 IAC165, 2 days after mock-infection, biological replicate #2 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
0.2 65.2 GSM262002 IAC165, 4 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
0.2 65.2 GSM421667 XOC, 2 hai - rep1 GSE16793 Comparative transcriptional profiling of rice undergoing infection by X. oryzae pv. oryzae or by X. oryzae pv. oryzicola
0.2 65.2 GSM281583 Rice Zhonghua11, biological rep1 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.13 3e-68 260 Os03g0775300 AK100507.1 - Radical SAM domain containing protein 2e-54 At1g75200 flavodoxin family protein / radical SAM domain-containing protein C.G. S.X.
0.07 1e-14 81 Os01g0897600 CA762923 - Glycoside hydrolase, family 1 protein 2e-7 At5g36890 BGLU42 (BETA GLUCOSIDASE 42) C.G. S.X.
0.03 5e-14 79 Os03g0418600 AK122114.1 - Conserved hypothetical protein 1e+0 At1g20930 CDKB2 C.G. S.X.
0.02 7e-1 36 Os03g0610900 AB125311.1 - Protein kinase, 41K (EC 2.7.1.-) 6e-54 At4g33950 OST1 (OPEN STOMATA 1) C.G. S.X.
0.01 3e+0 34 Os01g0152800 AK102745.1 - Protein kinase domain containing protein 1e-1 At5g49290 protein binding C.G. S.X.
0.01 3e+0 34 Os02g0198400 9630.m00971 - Conserved hypothetical protein 6e+0 At5g64490 binding C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 6e+0 32 Arabidopsis thaliana At3g20070 821546 TTN9 (TITAN9) Encodes a plant-specific protein of unknown function. Mutant embryos contain at most four small cells. The endosperm nucleoli are enlarged. Gene is expressed in siliques based on EST information. - - - C.G. S.X.
0.04 2e-6 54 Glycine max Gma.17994.1.S1_at BE823437 - - 2e-51 At1g75200 flavodoxin family protein / radical SAM domain-containing protein C.G. S.X.
0.03 7e-1 34 Hordeum vulgare HVSMEi0005H10r2_x_at HVSMEi0005H10r2 - - 3e+0 At3g08900 RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3) C.G. S.X.
0.08 8e-3 42 Populus trichocarpa PtpAffx.202751.1.S1_at pmrna5490 hypothetical protein - 9e-149 At1g75200 flavodoxin family protein / radical SAM domain-containing protein C.G. S.X.
0.03 4e-1 36 Triticum aestivum Ta.15632.1.S1_at CA485921 - - 3e+0 At4g17810 nucleic acid binding / transcription factor/ zinc ion binding C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1617917_at CF405637 - - 4e+0 At1g53100 acetylglucosaminyltransferase C.G. S.X.
0.03 9e+0 30 Zea mays ZmAffx.1065.1.A1_at AI881971 - - 1e+1 At5g36659 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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