CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0363600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.80 94.6 Os10g0363600 AK111523.1 - Cyclin-like F-box domain containing protein 4e-3 At1g22040 kelch repeat-containing F-box family protein S.X. H.G.
0.61 81.2 Os02g0830100 AK065077.1 - Oligopeptidase A 7e-24 At5g65620 peptidase M3 family protein / thimet oligopeptidase family protein S.X. H.G.
0.50 68.0 Os10g0502500 AK061824.1 - Cytochrome b5 domain containing protein 4e-14 At3g48890 ATMP2 S.X. H.G.
0.50 68.0 Os08g0562700 AK066773.1 - Aminopeptidase N 4e-44 At1g63770 peptidase M1 family protein S.X. H.G.
0.44 58.1 Os06g0728500 AK099928.1 - Hypothetical protein 2e-2 At1g70190 ribosomal protein L12 family protein S.X. H.G.
0.36 44.0 Os02g0773300 AK071811.1 - Pyridoxal phosphate-dependent deaminase familyprotein 3e-12 At1g48420 D-CDES (D-CYSTEINE DESULFHYDRASE) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
7.7 97.6 GSM357134 14-day-old seedling, rep 3 GSE14275 Expression data for heat shock in rice seedlings
7.1 97.4 GSM357133 14-day-old seedling, rep 2 GSE14275 Expression data for heat shock in rice seedlings
6.9 97.3 GSM159183 Y Leaf, biological rep 1 GSE6893 Expression data for reproductive development in rice
6.9 97.3 GSM159185 Y Leaf, biological rep 3 GSE6893 Expression data for reproductive development in rice
6.3 97.2 GSM357122 14-day-old seedling, rep 1 GSE14275 Expression data for heat shock in rice seedlings
5.6 96.9 GSM154954 Leaf_tZ-treatment_120min_replicate 1 GSE6719 Cytokinin responsive genes in rice
5.6 96.9 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
5.6 96.9 GSM173089 Rice MH63 Control3 GSE7197 Down-regulation of OsSRT1 induces DNA fragmentation and cell death in rice
5.6 96.9 GSM154948 Leaf_tZ-treatment_30min_replicate 1 GSE6719 Cytokinin responsive genes in rice
5.5 96.8 GSM154950 Leaf_tZ-treatment_30min_replicate 3 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-6 54 Os02g0574900 AK073087.1 - Cyclin-like F-box domain containing protein 4e+0 At3g45275 - C.G. S.X.
0.01 3e-2 42 Os05g0408300 AK071584.1 - Conserved hypothetical protein 2e-4 At1g10740 unknown protein C.G. S.X.
0.01 1e-1 40 Os01g0765600 AK108944.1 - Calcium-binding EF-hand domain containing protein 2e+0 At5g41440 zinc finger (C3HC4-type RING finger) family protein C.G. S.X.
0.01 1e-1 40 Os01g0950200 AK109284.1 - Conserved hypothetical protein 2e-3 At3g09270 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8) C.G. S.X.
0.01 1e-1 40 Os01g0950300 AK107822.1 - Glutathione S-transferase GST 29 (EC 2.5.1.18) 2e-3 At3g09270 ATGSTU8 (GLUTATHIONE S-TRANSFERASE TAU 8) C.G. S.X.
0.01 1e-1 40 Os02g0470000 AK120602.1 - TPR-like domain containing protein 4e-1 At2g36080 DNA-binding protein, putative C.G. S.X.
0.01 1e-1 40 Os02g0772500 AK100349.1 - Protein prenyltransferase domain containingprotein 4e-5 At3g17740 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-3 44 Arabidopsis thaliana At1g22040 838809 kelch repeat-containing F-box family protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:chloroplast;MPBOVFA - - - C.G. S.X.
0.10 2e-9 65 Glycine max GmaAffx.91020.1.S1_at CF806745 - - 3e-35 At1g22040 kelch repeat-containing F-box family protein C.G. S.X.
0.32 3e-76 286 Hordeum vulgare Contig10272_at Contig10272 - - 8e-13 At1g22040 kelch repeat-containing F-box family protein C.G. S.X.
0.02 5e+0 34 Populus trichocarpa PtpAffx.58511.1.S1_s_at BI128469 hypothetical protein - 1e+0 At3g09290 TAC1 (TELOMERASE ACTIVATOR1) C.G. S.X.
0.28 1e-34 149 Triticum aestivum Ta.8836.2.S1_at BJ246543 - - 1e-3 At1g22040 kelch repeat-containing F-box family protein C.G. S.X.
0.02 7e-2 38 Vitis vinifera 1619298_at CF515667 hypothetical protein LOC100268102 - 2e-2 At4g29735 unknown protein C.G. S.X.
0.15 5e-22 105 Zea mays Zm.17568.1.S1_at BM079997 hypothetical protein LOC100193097 - 1e+1 At4g29660 EMB2752 (EMBRYO DEFECTIVE 2752) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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