CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0350100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0350100 NM_195936.1 - - 4e-1 At3g47710 bHLH family protein S.X. H.G.
0.83 95.8 Os04g0366500 9632.m02816 - - 1e+1 At3g51060 STY1 (STYLISH 1) S.X. H.G.
0.83 95.8 Os01g0528900 9629.m03236 - - 4e+0 At4g31150 endonuclease V family protein S.X. H.G.
0.83 95.8 Os01g0521100 9629.m03165 - Hypothetical protein 3e+0 At4g10420 - S.X. H.G.
0.80 94.6 Os08g0426200 9636.m03305 - - 2e+0 At3g17580 unknown protein S.X. H.G.
0.63 82.7 Os09g0356700 9637.m01615 - - 6e-1 At4g21610 LOL2 (LSD ONE LIKE 2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
160.4 100.0 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
90.3 100.0 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
32.9 99.8 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
13.9 98.5 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
13.4 98.5 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
12.3 98.3 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
11.9 98.3 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.7 97.8 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.4 97.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
8.2 97.7 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.25 5e-27 121 Os02g0594700 AK111339.1 - Conserved hypothetical protein 4e-1 At3g16870 zinc finger (GATA type) family protein C.G. S.X.
0.05 6e-8 57 Os01g0780600 AK120823.1 - Photoreceptor-interacting protein-like(Non-phototropic hypocotyl-like protein) 5e-3 At5g66560 phototropic-responsive NPH3 family protein C.G. S.X.
0.05 1e-5 50 Os04g0636500 AK109716.1 - NPH3 domain containing protein 3e-10 At5g03250 phototropic-responsive NPH3 family protein C.G. S.X.
0.03 1e-2 40 Os06g0269100 9634.m01586 - - 5e-1 At4g24805 methyltransferase C.G. S.X.
0.02 2e-7 56 Os03g0609800 AK065225.1 - NPH3 domain containing protein 3e-5 At4g37590 NPY5 (NAKED PINS IN YUC MUTANTS 5) C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.07 4e-1 34 Arabidopsis thaliana At3g47710 823925 bHLH family protein F:transcription factor activity, DNA binding;P:regulation of transcription;C:nucleus;P - - - C.G. S.X.
0.04 2e+0 32 Glycine max PsAffx.C85000046_at PsAffx.C85000046 - - 6e+0 At3g43829 unknown protein C.G. S.X.
0.05 8e-1 32 Hordeum vulgare Contig23389_at Contig23389 - - 2e-2 At2g22370 unknown protein C.G. S.X.
0.09 1e-2 40 Populus trichocarpa PtpAffx.54366.1.A1_at CK087841 hypothetical protein - 7e-3 At4g31820 ENP (ENHANCER OF PINOID) C.G. S.X.
0.07 2e-3 42 Triticum aestivum TaAffx.92456.1.A1_at BJ265162 - - 1e+0 At2g29020 Rab5-interacting family protein C.G. S.X.
0.06 1e-1 34 Vitis vinifera 1617600_at CF513622 hypothetical protein LOC100267978 - 2e-5 At3g26490 phototropic-responsive NPH3 family protein C.G. S.X.
0.09 5e-2 36 Zea mays Zm.16810.2.A1_at AW067350 hypothetical protein LOC100192849 - 2e-3 At5g66560 phototropic-responsive NPH3 family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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