CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0346700

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0346700 NM_195908.1 - - 5e-1 At4g04614 unknown protein S.X. H.G.
0.67 87.2 Os11g0119366 9639.m00174 - - 4e+0 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) S.X. H.G.
0.61 81.2 Os03g0783300 9631.m05592 - - 3e-1 At3g60270 uclacyanin, putative S.X. H.G.
0.55 73.7 Os04g0199300 NM_196287.1 - - 7e-3 At1g33055 unknown protein S.X. H.G.
0.53 71.3 Os01g0725500 9630.m05457 - - 3e+0 At2g33820 MBAC1 S.X. H.G.
0.47 62.3 Os11g0150700 9639.m00448 - Protein kinase family protein 4e-2 At3g12690 AGC1.5 (AGC KINASE 1.5) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
74.8 99.9 GSM422674 Musa_DNA_RICE GSE16865 Heterologous microarrays for the study of drought stress in Musa
38.2 99.8 GSM377074 Genomic DNA - 45 day old leaf sample - mutant g282 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
35.0 99.8 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
31.6 99.7 GSM377070 Genomic DNA - 45 day old leaf sample - mutant d1 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
24.2 99.4 GSM377078 Genomic DNA - 45 day old leaf sample - mutant g6603 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
23.6 99.4 GSM377081 Genomic DNA - 45 day old leaf sample - mutant g7534 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.8 99.2 GSM377085 Genomic DNA - 45 day old leaf sample - mutant f2045 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.7 99.2 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377086 Genomic DNA - 45 day old leaf sample - IR64 wtcheck GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
20.3 99.1 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-34 147 Os04g0195100 AK107201.1 - Cyclin-like F-box domain containing protein 3e+0 At1g13380 unknown protein C.G. S.X.
0.06 2e-23 111 Os04g0521800 AK103369.1 - IAA-amino acid hydrolase homolog ILL3 3e-3 At3g02875 ILR1 (IAA-LEUCINE RESISTANT 1) C.G. S.X.
0.05 7e-17 89 Os08g0114100 AK099560.1 - Conserved hypothetical protein 4e-27 At1g64680 unknown protein C.G. S.X.
0.02 2e-7 57 Os04g0193300 AK106803.1 - Cyclin-like F-box domain containing protein 1e-3 At5g35170 adenylate kinase family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 5e-1 36 Arabidopsis thaliana At4g04614 3770064 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPVB - - - C.G. S.X.
0.03 2e-1 38 Glycine max GmaAffx.61766.1.S1_at BU927187 - - 2e-5 At1g77510 ATPDIL1-2 (PDI-LIKE 1-2) C.G. S.X.
0.02 6e-2 38 Hordeum vulgare Contig26276_at Contig26276 - - 8e-2 At4g30662 unknown protein C.G. S.X.
0.03 4e-2 40 Populus trichocarpa PtpAffx.219521.1.S1_at pmrna35464 hypothetical protein - 9e-1 At1g78200 protein phosphatase 2C, putative / PP2C, putative C.G. S.X.
0.04 8e-3 42 Triticum aestivum TaAffx.65271.1.S1_at BJ253242 - - 6e+0 At3g48209 - C.G. S.X.
0.02 5e-1 34 Vitis vinifera 1612008_at CF604996 hypothetical protein LOC100243222 - 1e+0 At4g08790 nitrilase, putative C.G. S.X.
0.03 5e-2 38 Zea mays Zm.3856.1.S1_at AW057112 - - 2e+1 At5g26262 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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