CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0335000

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.77 93.1 Os10g0335000 NM_195802.1 - Conserved hypothetical protein 1e+0 At1g33820 unknown protein S.X. H.G.
0.83 95.8 Os02g0791400 AK062787.1 - Cytochrome oxidase c, subunit VIb family protein 6e+0 At2g47910 CRR6 (chlororespiratory reduction 6) S.X. H.G.
0.79 93.6 Os07g0174900 9635.m00735 - Plant lipid transfer protein/Par allergen familyprotein 5e+0 At5g26890 unknown protein S.X. H.G.
0.77 93.1 Os09g0329700 9637.m01341 - UDP-glucuronosyl/UDP-glucosyltransferase familyprotein 1e-1 At5g14860 transferase, transferring glycosyl groups S.X. H.G.
0.74 91.4 Os01g0788400 AK109763.1 - Pectinesterase (EC 3.1.1.11) (Pectinmethylesterase) (PE) 2e-7 At3g59010 pectinesterase family protein S.X. H.G.
0.67 87.2 Os01g0127000 AK105526.1 - Multicopper oxidase, type 1 domain containingprotein 4e+0 At5g02270 ATNAP9 S.X. H.G.
0.61 81.2 Os06g0169900 CB096301 - Hypothetical protein 5e-1 At5g14320 30S ribosomal protein S13, chloroplast (CS13) S.X. H.G.
0.53 71.3 Os03g0195800 AK103007.1 - - 4e-13 At1g78000 SULTR1 S.X. H.G.
0.51 68.7 Os06g0199000 AK106381.1 - Glycine-rich cell wall structural protein 2precursor 1e-4 At1g54215 proline-rich family protein S.X. H.G.
0.45 58.8 Os12g0455000 AK111239.1 - Conserved hypothetical protein 1e+0 At4g09450 myb family transcription factor S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
52.7 99.9 GSM359905 FL478 root, salt-treated, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
51.7 99.9 GSM359906 FL478 root, salt-treated, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
38.5 99.8 GSM359907 FL478 root, salt-treated, biological replicate 3 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
34.0 99.8 GSM359913 IR63731 root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
28.1 99.6 GSM359903 FL478 root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
24.1 99.4 GSM359902 FL478 root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
23.5 99.4 GSM359911 IR29 root, salt-treated, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
22.2 99.3 GSM359914 IR63731 root, control, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
21.4 99.2 GSM359916 IR63731 root, salt-treated, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
21.3 99.2 GSM359917 IR63731 root, salt-treated, biological replicate 2 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 9e-6 52 Os10g0334200 9638.m01572 - - 4e-1 At5g20935 unknown protein C.G. S.X.
0.09 2e-5 52 Os01g0351500 9629.m02418 - - 9e-1 At2g33470 GLTP1 (glycolipid transfer protein 1) C.G. S.X.
0.05 4e-2 40 Os10g0334500 NM_195796.1 - Conserved hypothetical protein 2e-2 At1g07700 thioredoxin family protein C.G. S.X.
0.02 6e-1 36 Os03g0725900 9631.m05041 - - 7e-1 At4g16160 mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein C.G. S.X.
0.01 2e+0 34 Os09g0449000 9637.m02424 - Zn-finger-like, PHD finger domain containingprotein 1e+0 At2g44730 transcription factor C.G. S.X.
0.00 2e+0 34 Os04g0555500 AK108782.1 - The start codon is not identified. 4e-3 At2g45540 WD-40 repeat family protein / beige-related C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e+0 34 Arabidopsis thaliana At1g33820 840277 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBP - - - C.G. S.X.
0.04 2e+0 34 Glycine max GmaAffx.46137.1.S1_at BM093946 - - 8e-1 At1g29810 dehydratase family C.G. S.X.
0.04 2e+0 32 Hordeum vulgare HV_CEa0014D10r2_s_at HV_CEa0014D10r2 - - 7e+0 At5g63990 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative C.G. S.X.
0.03 6e+0 32 Populus trichocarpa PtpAffx.38213.1.A1_at CX172868 - - 1e+0 At3g14840 leucine-rich repeat family protein / protein kinase family protein C.G. S.X.
0.09 1e-6 54 Triticum aestivum Ta.13970.1.A1_at BQ752987 - - 8e-2 At2g31060 elongation factor family protein C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1622247_at CB001362 hypothetical protein LOC100244197 - 3e+0 At2g28800 ALB3 (ALBINO 3) C.G. S.X.
0.03 1e-1 36 Zea mays Zm.13002.1.S1_at CF041204 - - 1e-10 At4g27230 HTA2 (histone H2A) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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