CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0320400

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.91 98.9 Os10g0320400 AK072694.1 - ATP synthase gamma chain, mitochondrial precursor(EC 3.6.3.14) 1e-48 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) S.X. H.G.
0.67 87.2 Os07g0495200 AK070990.1 - ATP synthase delta' chain, mitochondrial precursor(EC 3.6.3.14) 1e-1 At5g47030 ATP synthase delta' chain, mitochondrial S.X. H.G.
0.50 68.0 Os03g0774200 AK119532.1 - NADH-ubiquinone oxidoreductase subunit 8 (EC1.6.5.3) 2e-71 At1g79010 NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial (TYKY) S.X. H.G.
0.46 60.9 Os05g0553000 AK071143.1 - ATP synthase beta chain, mitochondrial precursor(EC 3.6.3.14) 0 At5g08670 ATP binding / hydrogen ion transporting ATP synthase, rotational mechanism S.X. H.G.
0.44 58.1 Os08g0478200 AK068050.1 - ATP synthase D chain, mitochondrial (EC 3.6.3.14) 1e-29 At3g52300 ATPQ (ATP SYNTHASE D CHAIN, MITOCHONDRIAL) S.X. H.G.
0.33 38.8 Os04g0486600 BI797548 - Glyceraldehyde-3-phosphate dehydrogenase,cytosolic 3 (EC 1.2.1.12) 2e+0 At1g09220 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
3.0 94.6 GSM275410 Bala root tip_At the wax layer_rep3 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.7 94.1 GSM159173 Rice coleoptiles, 4 days old, aerobic, replicate N.2 (sample#10) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
2.7 94.1 GSM67053 FL478 control replicate 2 GSE3053 Rice salt expression
2.6 93.8 GSM262000 IAC165, 2 days after infection with S. hermonthica, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.6 93.8 GSM359908 IR29 root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
2.6 93.8 GSM261998 IAC165, 2 days after mock-infection, biological replicate #1 GSE10373 Rice cultivars undergoing a susceptible and resistant interaction with the parasitic plant Striga hermonthica
2.5 93.6 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
2.5 93.6 GSM67059 IR29 control replicate 2 GSE3053 Rice salt expression
2.5 93.6 GSM275415 Azucena root tip_Before the wax layer_Rep2 GSE10857 Gene expression of rice root tips before, at and buckled by a hard layer in two rice varieties
2.5 93.6 GSM359913 IR63731 root, control, biological replicate 1 GSE14403 Root-specific transcriptional profiling of contrasting rice genotypes in response to salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 1e-3 46 Os01g0935100 NM_190049.1 - - 2e-5 At5g47640 NF-YB2 (NUCLEAR FACTOR Y, SUBUNIT B2) C.G. S.X.
0.02 2e-2 42 Os09g0103100 CR283151 - AB-hydrolase associated lipase region domaincontaining protein 2e-1 At2g15230 ATLIP1 (Arabidopsis thaliana lipase 1) C.G. S.X.
0.01 6e-3 44 Os05g0323100 AK109472.1 - Rhodanese-like domain containing protein 7e-26 At2g40760 rhodanese-like domain-containing protein C.G. S.X.
0.01 2e-2 42 Os05g0567200 9633.m04611 - - 6e-8 At1g62300 WRKY6 C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.27 1e-48 194 Arabidopsis thaliana At2g33040 817866 ATP synthase gamma chain, mitochondrial (ATPC) F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:proton transport, ATP synthesis coupled proton transport;C:in 7 components;OBMFPA - - - C.G. S.X.
0.24 4e-40 167 Glycine max Gma.17344.1.S1_at CD409198 - - 7e-41 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.65 0 1045 Hordeum vulgare Contig2722_at Contig2722 - - 2e-32 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.19 2e-26 121 Populus trichocarpa PtpAffx.249.66.A1_s_at CV227553 hypothetical protein - 2e-52 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.55 0 993 Triticum aestivum Ta.14480.2.S1_at BU099921 - - 3e-28 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.35 2e-32 139 Vitis vinifera 1611755_at CB918301 hypothetical protein LOC100246670 - 4e-27 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
0.53 6e-163 573 Zea mays Zm.5289.2.A1_a_at AI600945 hypothetical protein LOC100274172 - 1e-30 At2g33040 ATP synthase gamma chain, mitochondrial (ATPC) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0015986 The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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