CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0208500

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.76 92.2 Os10g0208500 AK065698.1 - Conserved hypothetical protein 6e-2 At1g74630 pentatricopeptide (PPR) repeat-containing protein S.X. H.G.
0.34 40.0 Os05g0257100 AK101696.1 - Leucine-rich repeat, plant specific containingprotein 9e-4 At1g13910 leucine-rich repeat family protein S.X. H.G.
0.30 32.7 Os07g0438700 9635.m02464 - TLDc domain containing protein 1e-1 At2g05590 - S.X. H.G.
0.29 31.1 Os01g0777800 NM_191481.1 - Regulator of chromosomecondensation/beta-lactamase-inhibitor protein II domaincontaining protein 4e-2 At1g27060 regulator of chromosome condensation (RCC1) family protein S.X. H.G.
0.25 24.1 Os05g0240200 AK100136.1 - Disease resistance protein family protein 7e-7 At3g15880 protein binding S.X. H.G.
0.21 17.9 Os06g0283200 AK073829.1 - Zn-finger-like, PHD finger domain containingprotein 1e+0 At1g08110 lactoylglutathione lyase, putative / glyoxalase I, putative S.X. H.G.
0.19 15.1 Os02g0745800 AK059598.1 - Hypothetical protein 3e-18 At2g02910 - S.X. H.G.
0.17 12.6 Os05g0275600 AK069275.1 - Conserved hypothetical protein 2e+0 At5g15420 unknown protein S.X. H.G.
0.15 10.3 Os06g0130000 AK064427.1 - Tobacco mosaic virus helicase domain-bindingprotein (Fragment) 3e-27 At2g45500 ATP binding / nucleoside-triphosphatase/ nucleotide binding S.X. H.G.
0.13 8.2 Os03g0104100 AK099959.1 - Protein phosphatase 2C-like domain containingprotein 7e-5 At4g33920 protein phosphatase 2C family protein / PP2C family protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.2 99.6 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
25.7 99.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
21.0 99.2 GSM159265 Salt stress, biological rep 1 GSE6901 Expression data for stress treatment in rice seedlings
20.9 99.2 GSM377072 Genomic DNA - 45 day old leaf sample - mutant d1137 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.8 98.9 GSM377071 Genomic DNA - 45 day old leaf sample - mutant d256 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.5 98.9 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
17.1 98.8 GSM377084 Genomic DNA - 45 day old leaf sample - mutant f1856 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
16.1 98.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.7 98.7 GSM377076 Genomic DNA - 45 day old leaf sample - mutant g6485 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
15.3 98.7 GSM377082 Genomic DNA - 45 day old leaf sample - mutant g9799 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 0 1723 Os01g0392600 AK067469.1 - Hypothetical protein 9e+0 At5g60130 transcriptional factor B3 family protein C.G. S.X.
0.22 1e-152 541 Os10g0208600 AK068630.1 - Viral coat and capsid protein family protein 5e-1 At1g11700 unknown protein C.G. S.X.
0.20 0 686 Os04g0115700 AK072148.1 - Hypothetical protein 4e-4 At3g61060 AtPP2-A13 (Arabidopsis thaliana phloem protein 2-A13) C.G. S.X.
0.18 0 1104 Os11g0115600 AK063510.1 - Conserved hypothetical protein 1e+0 At2g44220 unknown protein C.G. S.X.
0.08 1e-180 636 Os08g0378000 AK067437.1 - Conserved hypothetical protein 6e-1 At4g27810 unknown protein C.G. S.X.
0.08 5e-16 87 Os10g0206500 CF294964 - Conserved hypothetical protein 4e-1 At5g47700 60S acidic ribosomal protein P1 (RPP1C) C.G. S.X.
0.06 3e-138 496 Os10g0208400 NM_195493.1 - - 6e+0 At5g16710 DHAR3 (dehydroascorbate reductase 1) C.G. S.X.
0.01 2e+0 36 Os01g0866100 AK068991.1 - - 5e-65 At5g09810 ACT7 (ACTIN 7) C.G. S.X.
0.01 2e+0 36 Os03g0125000 AK070779.1 - - 2e-3 At4g01310 ribosomal protein L5 family protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 6e-2 42 Arabidopsis thaliana At1g74630 843802 pentatricopeptide (PPR) repeat-containing protein F:unknown;P:biological_process unknown;C:endomembrane system;POMFB - - - C.G. S.X.
0.01 5e+0 36 Glycine max PsAffx.C54000089_at PsAffx.C54000089 - - 8e-1 At2g17340 pantothenate kinase-related C.G. S.X.
0.01 1e-1 40 Hordeum vulgare Contig9964_at Contig9964 - - 3e-9 At2g04550 IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5) C.G. S.X.
0.01 3e-1 40 Populus trichocarpa PtpAffx.209059.1.S1_at pmrna17928 hypothetical protein - 4e-1 At5g65533 unknown protein C.G. S.X.
0.01 9e-1 38 Triticum aestivum TaAffx.65829.1.A1_at BJ219424 - - 2e+0 At1g61795 - C.G. S.X.
0.01 1e-3 46 Vitis vinifera 1616636_at CF404156 hypothetical protein LOC100262356 - 7e-1 At2g41750 DTW domain-containing protein C.G. S.X.
0.01 1e-1 40 Zea mays Zm.8555.1.A1_at BM075305 hypothetical protein LOC100280007 - 4e-1 At1g67350 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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