CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0195600

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.67 87.2 Os10g0195600 AK100207.1 - Transferase family protein 4e+0 At2g42380 bZIP transcription factor family protein S.X. H.G.
0.50 68.0 Os02g0178700 AK110943.1 - Basic helix-loop-helix dimerisation region bHLHdomain containing protein 5e-1 At2g40475 unknown protein S.X. H.G.
0.21 17.9 Os03g0797800 AK059619.1 - AUX/IAA protein family protein 1e-1 At3g15540 IAA19 (INDOLE-3-ACETIC ACID INDUCIBLE 19) S.X. H.G.
0.13 8.2 Os01g0706700 AK072738.1 - - 5e-9 At1g73020 unknown protein S.X. H.G.
0.07 3.7 Os03g0859100 AK060992.1 - Lipolytic enzyme, G-D-S-L family protein 2e-1 At5g40630 ubiquitin family protein S.X. H.G.
0.04 2.0 Os11g0528400 AK069554.1 - Conserved hypothetical protein 4e-9 At3g19340 - S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
76.0 99.9 GSM422676 Control GSE16865 Heterologous microarrays for the study of drought stress in Musa
65.7 99.9 GSM195227 Anther GSE7951 Genome-wide gene expression profiling of rice stigma
14.2 98.5 GSM159272 Rice coleoptiles, 4 days old, anoxic, REPLICATE 2 (Sample #12) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
11.9 98.3 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
8.8 97.8 GSM159271 Rice coleoptiles, 4 days old, anoxic, REPLICATE 1 (Sample #11) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
8.4 97.7 GSM159172 Rice coleoptiles, 4 days old, aerobic, replicate N.1 (sample#9) GSE6908 Transcript Profiling of the Aerobic and Anoxic Rice Coleoptile
7.2 97.4 GSM431936 Shoot- -Fe+P biological rep2 GSE17245 Transcriptome analysis of iron and phosphorus interaction in rice seedlings
7.1 97.4 GSM377077 Genomic DNA - 45 day old leaf sample - mutant g6489 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
5.6 96.9 GSM281588 Rice mutant dst, biological rep3 GSE11175 Comparison of transcriptome profile between wild-type and dst mutant plants
5.3 96.7 GSM99864 TCHW P7_ir29 control, biological rep1 GSE4438 Expression data from rice under salinity stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.18 8e-31 137 Os07g0421600 9635.m02286 - - 7e-1 At4g38740 ROC1 (ROTAMASE CYP 1) C.G. S.X.
0.12 3e-24 115 Os10g0133500 AK066866.1 - Transferase family protein 4e-3 At4g36780 transcription regulator C.G. S.X.
0.12 4e-11 71 Os12g0458100 AK065433.1 - Transferase family protein 4e+0 At1g18790 RWP-RK domain-containing protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e+0 34 Arabidopsis thaliana At2g42380 818839 bZIP transcription factor family protein Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP61. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells. - - - C.G. S.X.
0.01 1e-1 40 Glycine max GmaAffx.64030.1.S1_at AI495513 - - 1e-3 At3g62770 AtATG18a C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig12098_at Contig12098 - - 2e-6 At1g16210 unknown protein C.G. S.X.
0.02 1e-1 40 Populus trichocarpa PtpAffx.217882.1.S1_at pmrna33326 hypothetical protein - 9e+0 At2g42540 COR15A (COLD-REGULATED 15A) C.G. S.X.
0.27 2e-64 248 Triticum aestivum Ta.30590.1.A1_at CK205601 - - 2e+0 At4g15460 glycine-rich protein C.G. S.X.
0.01 3e-1 36 Vitis vinifera 1611481_s_at BQ796815 hypothetical protein LOC100254523 - 2e+0 At3g12490 cysteine protease inhibitor, putative / cystatin, putative C.G. S.X.
0.03 1e-4 48 Zea mays ZmAffx.684.1.A1_at AI734818 transferase family protein - 1e+1 At5g40620 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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