CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID Os10g0195100

Gene name

Organism Oryza sativa

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description Ev AGI code Arabidopsis gene name S.X. H.G. Other DB
0.57 77.0 Os10g0195100 NM_195334.1 - En/Spm-like transposon proteins family protein 4e-2 At5g35610 paired amphipathic helix repeat-containing protein S.X. H.G.
0.53 71.3 Os06g0616400 AK072464.1 - Conserved hypothetical protein 5e-1 At3g07220 transcriptional activator, putative S.X. H.G.
0.46 60.9 Os08g0535000 AK066324.1 - Conserved hypothetical protein 6e+0 At4g07940 unknown protein S.X. H.G.
0.44 58.1 Os08g0338000 AK068483.1 - Conserved hypothetical protein 2e-1 At1g68540 oxidoreductase family protein S.X. H.G.
0.38 46.9 Os08g0330800 AK107544.1 - - 2e+0 At2g34010 unknown protein S.X. H.G.
0.22 19.4 Os11g0586100 AK108746.1 - Protein kinase domain containing protein 2e-1 At3g63330 protein kinase family protein S.X. H.G.
0.19 15.1 Os09g0242600 AK072475.1 - Conserved hypothetical protein 1e-1 At4g16240 unknown protein S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
24.2 99.4 GSM409422 Nipponbare_young panicle 2cm, biological rep2 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
19.6 99.1 GSM409421 Nipponbare_young panicle 2cm, biological rep1 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
15.7 98.7 GSM409428 Nipponbare_young panicle 2cm, biological rep4 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
15.1 98.6 GSM409427 Nipponbare_young panicle 2cm, biological rep3 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
10.8 98.1 GSM422672 Drought GSE16865 Heterologous microarrays for the study of drought stress in Musa
6.5 97.2 GSM409429 Nipponbare_young panicle 2cm, biological rep5 GSE16265 SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip
6.3 97.2 GSM154956 Leaf_tZ-treatment_120min_replicate 3 GSE6719 Cytokinin responsive genes in rice
5.2 96.7 GSM377073 Genomic DNA - 45 day old leaf sample - mutant d2943 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.9 96.5 GSM377075 Genomic DNA - 45 day old leaf sample - mutant g650 GSE15071 Detection of genomic deletions in rice by genomic DNA hybridization to oligonucleotide microarrays
4.7 96.4 GSM154955 Leaf_tZ-treatment_120min_replicate 2 GSE6719 Cytokinin responsive genes in rice
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 6e-15 85 Os08g0215200 AK072536.1 - En/Spm-like transposon proteins family protein 1e-1 At1g10950 endomembrane protein 70, putative C.G. S.X.
0.07 1e-111 406 Os12g0416900 AK067230.1 - Hypothetical protein 2e+0 At5g17440 LUC7 N_terminus domain-containing protein C.G. S.X.
0.04 8e-5 52 Os08g0215300 AK121156.1 - Hypothetical protein 2e+0 At3g59370 unknown protein C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 4e-2 42 Arabidopsis thaliana At5g35610 833533 paired amphipathic helix repeat-containing protein F:molecular_function unknown;P:regulation of transcription, DNA-dependent;C:nucleus;MFPO - - - C.G. S.X.
0.01 2e-1 40 Glycine max Gma.6245.1.S1_at CA938361 - - 3e+0 At5g27247 unknown protein C.G. S.X.
0.01 5e+0 34 Hordeum vulgare Contig25970_at Contig25970 - - 6e-1 At5g65165 SDH2-3 C.G. S.X.
0.01 2e-1 40 Populus trichocarpa PtpAffx.213595.1.S1_at pmrna26550 hypothetical protein - 1e-13 At2g38000 chaperone protein dnaJ-related C.G. S.X.
0.01 6e-1 38 Triticum aestivum TaAffx.45627.1.S1_at CK163421 - - 1e+0 At1g69720 ho3 (HEME OXYGENASE 3) C.G. S.X.
0.01 2e-4 48 Vitis vinifera 1608536_at CA809124 - - 1e+0 At5g16980 NADP-dependent oxidoreductase, putative C.G. S.X.
0.01 1e+0 36 Zea mays Zm.11661.1.A1_at BM379776 - - 1e+0 At3g24570 peroxisomal membrane 22 kDa family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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